RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TMPRSS2O15393 492 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ZG16BQ96DA0 208 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 MTCH2Q9Y6C9 303 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 EWSR1Q01844 656 aaKnown RBP eCLIP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ROM1Q03395 351 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 C10orf113Q5VZT2 155 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 SH2D5Q6ZV89 423 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 LDLRAD3Q86YD5 345 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 PUSL1Q8N0Z8 303 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 GBGT1Q8N5D6 347 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 METTL1Q9UBP6 276 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 OR2A4O95047 310 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF418Q8TF45 676 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 OR2A7Q96R45 310 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 FOLR2P14207 255 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 EPHA8P29322 1005 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 NKG7Q16617 165 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 KIRREL2Q6UWL6 708 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ADAD2Q8NCV1 583 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 WIPI2Q9Y4P8 454 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.55
SRGAP3-201ENST00000360413 LEPROTL1O95214 131 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 CA6P23280 308 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 DEFB123Q8N688 67 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 C17orf47Q8NEP4 570 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 SEC11BP0C7V7 166 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 TMIGD3P0DMS9 266 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 GABRG2P18507 467 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 APOBEC4Q8WW27 367 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 DDB2Q92466 427 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 RND1Q92730 232 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 GMPPAQ96IJ6 420 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 RBBP6Q7Z6E9 1792 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 HERPUD1Q15011 391 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 CLEC2AQ6UVW9 174 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 PITX3O75364 302 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 ATOH7Q8N100 152 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 OR1L8Q8NGR8 309 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 RECKO95980 971 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 BCL2P10415 239 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 TNXAQ16473 311 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 MAJINQ3KP22 176 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 CXorf67Q86X51 503 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 SARGQ9BW04 601 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 ETHE1O95571 254 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 RELQ04864 619 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 PKDREJQ9NTG1 2253 aa11.64□□□□□ -0.55
SRGAP3-201ENST00000360413 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 PQLC2LA1A4F0 135 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 K7ESM1 405 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 MT-ND6P03923 174 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 IL4P05112 153 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 LRRC75BQ2VPJ9 315 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 PMCHL2Q9BQD1 86 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 DERL1Q9BUN8 251 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 ANK1P16157 1881 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 ZNF735P0CB33 412 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 CXCL2P19875 107 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 VDAC1P21796 283 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 OR10S1Q8NGN2 331 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 C4orf45Q96LM5 186 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 KCPQ6ZWJ8 1503 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 CTXND1A0A1B0GTU2 59 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 C21orf140B9A014 251 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 ERVH48-1M5A8F1 160 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 KLK8O60259 260 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 EPPINO95925 133 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 PSMG4Q5JS54 123 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 TMEM171Q8WVE6 324 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 TNFSF18Q9UNG2 199 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 SIGLEC7Q9Y286 467 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 DYSFO75923 2080 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 PTP4A3O75365 173 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 TEX30Q5JUR7 227 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 ALKAL1Q6UXT8 129 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 MAS1LP35410 378 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 NUTF2P61970 127 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 FAM106CPP0CH98 169 aa11.63□□□□□ -0.55
SRGAP3-201ENST00000360413 C17orf51A8MQB3 221 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 HBZP02008 142 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 KLF9Q13886 244 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 SHISA5Q8N114 240 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 STARD10Q9Y365 291 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 AUP1Q9Y679 476 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 CA1P00915 261 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 BHLHA15Q7RTS1 189 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 OR2Y1Q8NGV0 311 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 PTX4Q96A99 478 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 GMLQ99445 158 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 A8MWL6 223 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 H3BMH7 237 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 MPLP40238 635 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 NMBP08949 121 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms