RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 DMRTA1Q5VZB9 504 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 OSR2Q8N2R0 312 aa12.8□□□□□ -0.36
UBAP1-202ENST00000359544 C2orf72A6NCS6 295 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 NXPH3O95157 252 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 LCATP04180 440 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 FTH1P19P0C7X4 201 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 PSMB3P49720 205 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 TMEM267Q0VDI3 215 aaPredicted RBP12.79□□□□□ -0.36
UBAP1-202ENST00000359544 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 SSX7Q7RTT5 188 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 OR5D13Q8NGL4 314 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 RPUSD4Q96CM3 377 aaKnown RBP12.79□□□□□ -0.36
UBAP1-202ENST00000359544 DIRC2Q96SL1 478 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 SLC33A1O00400 549 aaPredicted RBP12.79□□□□□ -0.36
UBAP1-202ENST00000359544 MSR1P21757 451 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 CAPZBP47756 277 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 UBE2NP61088 152 aaKnown RBP12.79□□□□□ -0.36
UBAP1-202ENST00000359544 BRICD5Q6PL45 260 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 LHFPL2Q6ZUX7 228 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 OXGR1Q96P68 337 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 SLC7A10Q9NS82 523 aa12.79□□□□□ -0.36
UBAP1-202ENST00000359544 LY6G6EA0A0G2JKS1 128 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 B4DGG1 531 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 CNOT4O95628 575 aaKnown RBP12.78□□□□□ -0.36
UBAP1-202ENST00000359544 IL6RP08887 468 aaPredicted RBP12.78□□□□□ -0.36
UBAP1-202ENST00000359544 EDN3P14138 238 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 TMEM183BQ1AE95 376 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 PIGYQ3MUY2 71 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 DHRS13Q6UX07 377 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 NAT6Q93015 286 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 LHX4Q969G2 390 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 BORCS8Q96FH0 119 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 MRGPRX4Q96LA9 322 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 PARLQ9H300 379 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 SLC39A9Q9NUM3 307 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 TAAR3PQ9P1P4 343 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 U3KQA8 63 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 M0R135 149 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 VENTXO95231 258 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 SLC25A6P12236 298 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 CD82P27701 267 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 EFNA3P52797 238 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 COTL1Q14019 142 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 CLEC12BQ2HXU8 276 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 COL5A1-AS1Q5SY13 56 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 GUSBP11Q6P575 273 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 SPTSSAQ969W0 71 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 ZNF799Q96GE5 643 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 PARD6GQ9BYG4 376 aaPredicted RBP12.78□□□□□ -0.36
UBAP1-202ENST00000359544 OR2J1Q9GZK6 312 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 PLK3Q9H4B4 646 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 IL36GQ9NZH8 169 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 ST3GAL6Q9Y274 331 aa12.78□□□□□ -0.36
UBAP1-202ENST00000359544 H0Y980 276 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 H3BP45 60 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 TCN2P20062 427 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 GNG10P50151 68 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 HBG1P69891 147 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 HBG2P69892 147 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 RTP5Q14D33 572 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 RNPS1Q15287 305 aaKnown RBP12.77□□□□□ -0.37
UBAP1-202ENST00000359544 LRRC75BQ2VPJ9 315 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 TEX43Q6ZNM6 134 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 ZNF818PQ6ZRF7 136 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 GAPTQ8N292 157 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 MRPL30Q8TCC3 161 aaKnown RBP12.77□□□□□ -0.37
UBAP1-202ENST00000359544 NEK7Q8TDX7 302 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.37
UBAP1-202ENST00000359544 SDSLQ96GA7 329 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 REPIN1Q9BWE0 567 aaKnown RBP12.77□□□□□ -0.37
UBAP1-202ENST00000359544 ZNF442Q9H7R0 627 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 TRAPPC1Q9Y5R8 145 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 SHISA8B8ZZ34 492 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 GYPAP02724 150 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 OTX1P32242 354 aaPredicted RBP12.77□□□□□ -0.37
UBAP1-202ENST00000359544 TNFSF10P50591 281 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 OR5I1Q13606 314 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 ENDOGQ14249 297 aaKnown RBP12.77□□□□□ -0.37
UBAP1-202ENST00000359544 FAM180AQ6UWF9 173 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 TOMM20LQ6UXN7 152 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 DTX1Q86Y01 620 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 ZNF525Q8N782 197 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 WFIKKN1Q96NZ8 548 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 ZFP30Q9Y2G7 519 aa12.77□□□□□ -0.37
UBAP1-202ENST00000359544 LMO7DNF2Z398 122 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 SIAH2O43255 324 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 UMODP07911 640 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 BLKP51451 505 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 RPS18P62269 152 aaKnown RBP12.76□□□□□ -0.37
UBAP1-202ENST00000359544 SLC25A53Q5H9E4 307 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 Q6ZS49 121 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 MANBALQ9NQG1 85 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 TMEM106BQ9NUM4 274 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 IGKV1-27A0A075B6S5 117 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 EFNA2O43921 213 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 WNT5AP41221 380 aa12.76□□□□□ -0.37
UBAP1-202ENST00000359544 RPL15P61313 204 aaKnown RBP12.76□□□□□ -0.37
UBAP1-202ENST00000359544 PAFAH1B2P68402 229 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 372.4 ms