RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PPIAL4AQ9Y536 164 aa16.02■□□□□ 0.16
SHANK1-202ENST00000359082 VSIG8P0DPA2 414 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 TMEM189A5PLL7 270 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 IL11P20809 199 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 TAS2R60P59551 318 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 GUCA2BQ16661 112 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 C1orf185Q5T7R7 199 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 TPRX1Q8N7U7 411 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 OIT3Q8WWZ8 545 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 PRDM14Q9GZV8 571 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 MS4A5Q9H3V2 200 aa16.02■□□□□ 0.15
SHANK1-202ENST00000359082 COX19Q49B96 90 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 C19orf54Q5BKX5 351 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 WDFY1Q8IWB7 410 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 ZFP30Q9Y2G7 519 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 CD74P04233 296 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 C1orf53Q5VUE5 145 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 MRPL30Q8TCC3 161 aaKnown RBP16.01■□□□□ 0.15
SHANK1-202ENST00000359082 PRDX2P32119 198 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 MIEN1Q9BRT3 115 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 IGHV3-72A0A0B4J1Y9 119 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 UQCRFS1P47985 274 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 GFRA1P56159 465 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 GABRA6Q16445 453 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 LGALSLQ3ZCW2 172 aaPredicted RBP16.01■□□□□ 0.15
SHANK1-202ENST00000359082 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 ZPLD1Q8TCW7 415 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 CCL13Q99616 98 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 CD82P27701 267 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 SLC35B1P78383 322 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 RRN3P1Q2M238 152 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 C16orf92Q96LL3 132 aa16.01■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF735P0CB33 412 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 FOXL2P58012 376 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF343Q6P1L6 599 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF714Q96N38 554 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 SIRT7Q9NRC8 400 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 CA2P00918 260 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF250P15622 560 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 MDKP21741 143 aaPredicted RBP16■□□□□ 0.15
SHANK1-202ENST00000359082 SLC25A33Q9BSK2 321 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 DTX4Q9Y2E6 619 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 CTXND1A0A1B0GTU2 59 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 SPINT1O43278 529 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF385AQ96PM9 386 aaKnown RBP16■□□□□ 0.15
SHANK1-202ENST00000359082 CHST5Q9GZS9 411 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 KLHDC2Q9Y2U9 406 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 CD99P14209 185 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF721Q8TF20 911 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 TMEM171Q8WVE6 324 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 TP53RKQ96S44 253 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 MRPS18BQ9Y676 258 aaKnown RBP16■□□□□ 0.15
SHANK1-202ENST00000359082 PKIAP61925 76 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 EBLN2Q6P2I7 272 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 ZBTB34Q8NCN2 500 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 DIRC3C9JPN6 131 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 RBM11P57052 281 aaKnown RBP16■□□□□ 0.15
SHANK1-202ENST00000359082 RPL31P62899 125 aaKnown RBP16■□□□□ 0.15
SHANK1-202ENST00000359082 RAB24Q969Q5 203 aa16■□□□□ 0.15
SHANK1-202ENST00000359082 NUBP1P53384 320 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 PEBP1P30086 187 aaKnown RBP15.99■□□□□ 0.15
SHANK1-202ENST00000359082 COMPP49747 757 aaPredicted RBP15.99■□□□□ 0.15
SHANK1-202ENST00000359082 PLAURQ03405 335 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 LRRC75BQ2VPJ9 315 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 MEGF10Q96KG7 1140 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 RTN4RQ9BZR6 473 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 PLAC1Q9HBJ0 212 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 A0A1W2PPV9 198 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 K7N7A8 449 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 RAB29O14966 203 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 CCL8P80075 99 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 GGTLC2Q14390 218 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 OR10J6PQ8NGY7 276 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 RNF133Q8WVZ7 376 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 FBLL1A6NHQ2 334 aaKnown RBP15.99■□□□□ 0.15
SHANK1-202ENST00000359082 ATP6V0CP27449 155 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 GPR6P46095 362 aaPredicted RBP15.99■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF738Q8NE65 137 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 STXBP6Q8NFX7 210 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 OR4C45A6NMZ5 311 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 PRF1P14222 555 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 DCAF10Q5QP82 559 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 OR8G5Q8NG78 346 aa15.99■□□□□ 0.15
SHANK1-202ENST00000359082 HYPMO75409 117 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 SCGB1A1P11684 91 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 CCDC144NLQ6NUI1 221 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 OVCH2Q7RTZ1 564 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 METTL1Q9UBP6 276 aaKnown RBP15.98■□□□□ 0.15
SHANK1-202ENST00000359082 OPN4Q9UHM6 478 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 CEACAM18A8MTB9 384 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 F12P00748 615 aaPredicted RBP15.98■□□□□ 0.15
SHANK1-202ENST00000359082 IGKV3D-11A0A0A0MRZ8 115 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 IGKV3-11P04433 115 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 HERPUD1Q15011 391 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 TM4SF20Q53R12 229 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 GPA33Q99795 319 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 SS18L1O75177 396 aaPredicted RBP15.98■□□□□ 0.15
SHANK1-202ENST00000359082 ZNF273Q14593 569 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 METTL26Q96S19 204 aa15.98■□□□□ 0.15
SHANK1-202ENST00000359082 AKIRIN1Q9H9L7 192 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms