RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TMEM174Q8WUU8 243 aa9.79□□□□□ -0.84
COL11A1-202ENST00000358392 METTL26Q96S19 204 aa9.79□□□□□ -0.84
COL11A1-202ENST00000358392 PRRC2BQ5JSZ5 2229 aaKnown RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 NUP214P35658 2090 aaPredicted RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 ATG2BQ96BY7 2078 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 MUC1P15941 1255 aaPredicted RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SSPNQ14714 243 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 Q5PR19 223 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 OR10J6PQ8NGY7 276 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 LSM10Q969L4 123 aaKnown RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 ZNF665Q9H7R5 613 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 GPR35Q9HC97 309 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SYNGR1O43759 233 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SS18L1O75177 396 aaPredicted RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 HOXA6P31267 233 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 LRRC75BQ2VPJ9 315 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 FLRT3Q9NZU0 649 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 PRNDQ9UKY0 176 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SPAG17Q6Q759 2223 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 PITX3O75364 302 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 NAT2P11245 290 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 HCP5Q6MZN7 132 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 PWWP2BQ6NUJ5 590 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 NUDT16L1Q9BRJ7 211 aaKnown RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 RNF122Q9H9V4 155 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 KLK13Q9UKR3 277 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SIGLEC1Q9BZZ2 1709 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SLX4Q8IY92 1834 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SLC25A17O43808 307 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 VSIG10L2P0DP72 767 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 RNF133Q8WVZ7 376 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 PRSS27Q9BQR3 290 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
COL11A1-202ENST00000358392 PARLQ9H300 379 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 ZFP64Q9NPA5 681 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 PXMP4Q9Y6I8 212 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SLC25A40Q8TBP6 338 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 CT55Q8WUE5 264 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 LILRA5A6NI73 299 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 IGLV3-25P01717 112 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 EBLN2Q6P2I7 272 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 SH2D5Q6ZV89 423 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 C10orf126Q8N4M7 172 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 GUCD1Q96NT3 240 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 MIXL1Q9H2W2 232 aa9.78□□□□□ -0.84
COL11A1-202ENST00000358392 CRYBG1Q9Y4K1 1723 aa9.77□□□□□ -0.84
COL11A1-202ENST00000358392 RAG2P55895 527 aa9.77□□□□□ -0.84
COL11A1-202ENST00000358392 FAM209AQ5JX71 171 aa9.77□□□□□ -0.84
COL11A1-202ENST00000358392 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.84
COL11A1-202ENST00000358392 SYT8Q8NBV8 401 aa9.77□□□□□ -0.84
COL11A1-202ENST00000358392 CTXND1A0A1B0GTU2 59 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 FAM74A7A6NL05 159 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 H3BTX0 84 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 HAX1O00165 279 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 KIAA1644Q3SXP7 199 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 RBFOX2O43251 390 aaKnown RBP eCLIP9.77□□□□□ -0.85
COL11A1-202ENST00000358392 PQLC2Q6ZP29 291 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 MSRB3Q8IXL7 192 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 PTP4A1Q93096 173 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 SLC25A10Q9UBX3 287 aaPredicted RBP9.77□□□□□ -0.85
COL11A1-202ENST00000358392 MPC1Q9Y5U8 109 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 IGKV3-20P01619 116 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 GALP22466 123 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 OR4D11Q8NGI4 311 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 MAFAQ8NHW3 353 aaPredicted RBP9.77□□□□□ -0.85
COL11A1-202ENST00000358392 UCN2Q96RP3 112 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 RARRES2Q99969 163 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 CBLN4Q9NTU7 201 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 OR5AC2Q9NZP5 309 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 RNF7Q9UBF6 113 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 SSC5DA1L4H1 1573 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 TMEM262E9PQX1 116 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 HRKO00198 91 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 OPN4Q9UHM6 478 aa9.77□□□□□ -0.85
COL11A1-202ENST00000358392 ZFC3H1O60293 1989 aaKnown RBP9.76□□□□□ -0.85
COL11A1-202ENST00000358392 ZIC3O60481 467 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 NPBWR2P48146 333 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 PCP4P48539 62 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 OR1L8Q8NGR8 309 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 CDX2Q99626 313 aaPredicted RBP9.76□□□□□ -0.85
COL11A1-202ENST00000358392 IL19Q9UHD0 177 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 DICER1Q9UPY3 1922 aaKnown RBP9.76□□□□□ -0.85
COL11A1-202ENST00000358392 CLDN14O95500 239 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 REG1AP05451 166 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 OR4B1Q8NGF8 309 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 OR6X1Q8NH79 312 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 PGLYRP3Q96LB9 341 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 ZDHHC8Q9ULC8 765 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 CTDSPLO15194 276 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 VDAC1P21796 283 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 COX19Q49B96 90 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 DMKNQ6E0U4 476 aaPredicted RBP9.76□□□□□ -0.85
COL11A1-202ENST00000358392 ERASQ7Z444 233 aa9.76□□□□□ -0.85
COL11A1-202ENST00000358392 FADS6Q8N9I5 356 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms