RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 PRDX4Q13162 271 aa20.2■□□□□ 0.82
NPAS3-203ENST00000357798 USF2Q15853 346 aaPredicted RBP20.2■□□□□ 0.82
NPAS3-203ENST00000357798 OR56B2PQ8NGI1 322 aa20.2■□□□□ 0.82
NPAS3-203ENST00000357798 GPR35Q9HC97 309 aa20.2■□□□□ 0.82
NPAS3-203ENST00000357798 CHD3Q12873 2000 aaKnown RBP20.2■□□□□ 0.82
NPAS3-203ENST00000357798 LHX4Q969G2 390 aa20.2■□□□□ 0.82
NPAS3-203ENST00000357798 CLDN23Q96B33 292 aa20.2■□□□□ 0.82
NPAS3-203ENST00000357798 TIMM9Q9Y5J7 89 aa20.2■□□□□ 0.82
NPAS3-203ENST00000357798 HSPB6O14558 160 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 GZMHP20718 246 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 B3GALT5-AS1P59052 145 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 SLC10A1Q14973 349 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 RAB30Q15771 203 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 IZUMO4Q1ZYL8 232 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 TCEAL6Q6IPX3 200 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 ZNF66Q6ZN08 573 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 SLC39A9Q9NUM3 307 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 IL36RNQ9UBH0 155 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 TRAPPC2LH3BP13 241 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 IL18BPO95998 194 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 HRASP01112 189 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 IGKV1-39P01597 117 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 IGKV1D-39P04432 117 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 CARD18P57730 90 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 P2RY6Q15077 328 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 TGIF2LXQ8IUE1 241 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 MKXQ8IYA7 352 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 OR10J5Q8NHC4 309 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 ADGRG7Q96K78 797 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 WDR54Q9H977 334 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 MTCH1Q9NZJ7 389 aa20.19■□□□□ 0.82
NPAS3-203ENST00000357798 IGHV1-45A0A0A0MS14 117 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 SNRPCP09234 159 aaKnown RBP20.18■□□□□ 0.82
NPAS3-203ENST00000357798 TUBG1P23258 451 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 ERVS71-1P61550 626 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 LINC00596Q86U02 117 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 NECAP1Q8NC96 275 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 KCNE4Q8WWG9 221 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 TAF15Q92804 592 aaKnown RBP eCLIP20.18■□□□□ 0.82
NPAS3-203ENST00000357798 STRADBQ9C0K7 418 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 AKIRIN1Q9H9L7 192 aaPredicted RBP20.18■□□□□ 0.82
NPAS3-203ENST00000357798 TCAPO15273 167 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 GPM6AP51674 278 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 ELLP55199 621 aaPredicted RBP20.18■□□□□ 0.82
NPAS3-203ENST00000357798 BEND4Q6ZU67 534 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 IMMP1LQ96LU5 166 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 OR4C12Q96R67 309 aa20.18■□□□□ 0.82
NPAS3-203ENST00000357798 IGHV5-10-1A0A0J9YXX1 117 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 ZNF705GA8MUZ8 300 aaPredicted RBP20.17■□□□□ 0.82
NPAS3-203ENST00000357798 NUTF2P61970 127 aaKnown RBP20.17■□□□□ 0.82
NPAS3-203ENST00000357798 CEACAM21Q3KPI0 293 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 ZDHHC23Q8IYP9 409 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 REPIN1Q9BWE0 567 aaKnown RBP20.17■□□□□ 0.82
NPAS3-203ENST00000357798 NUBP1P53384 320 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 ACTL10Q5JWF8 245 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 GGNQ86UU5 652 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 ANAPC16Q96DE5 110 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 ERRFI1Q9UJM3 462 aaPredicted RBP20.17■□□□□ 0.82
NPAS3-203ENST00000357798 SZT2Q5T011 3432 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 APLNRP35414 380 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 ACOT6Q3I5F7 207 aaPredicted RBP20.17■□□□□ 0.82
NPAS3-203ENST00000357798 CPEB3Q8NE35 698 aaKnown RBP20.17■□□□□ 0.82
NPAS3-203ENST00000357798 TMEM18Q96B42 140 aa20.17■□□□□ 0.82
NPAS3-203ENST00000357798 LRRC3CA6NJW4 275 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 IGKV1-5P01602 117 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 CCKARP32238 428 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 PSMB3P49720 205 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 OR10V1Q8NGI7 309 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 MRPL37Q9BZE1 423 aaKnown RBP20.16■□□□□ 0.82
NPAS3-203ENST00000357798 OR51I2Q9H344 312 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 TNRC6AQ8NDV7 1962 aaKnown RBP20.16■□□□□ 0.82
NPAS3-203ENST00000357798 VCANP13611 3396 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 A0A1W2PQM1 296 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 SRD5A2P31213 254 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 FAM180AQ6UWF9 173 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 C20orf204Q6ZNR8 217 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 RPUSD4Q96CM3 377 aaKnown RBP20.16■□□□□ 0.82
NPAS3-203ENST00000357798 PCGF1Q9BSM1 259 aa20.16■□□□□ 0.82
NPAS3-203ENST00000357798 NPIPB11E5RHQ5 1161 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 DEGS1O15121 323 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 CYTIPO60759 359 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 GGCTO75223 188 aaKnown RBP20.15■□□□□ 0.82
NPAS3-203ENST00000357798 TYMSP04818 313 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 RPP25LQ8N5L8 163 aaKnown RBP20.15■□□□□ 0.82
NPAS3-203ENST00000357798 CCDC74BQ96LY2 380 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 CRIM1Q9NZV1 1036 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 CXCL13O43927 109 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 COX6A1P12074 109 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 IDH3GP51553 393 aaPredicted RBP20.15■□□□□ 0.82
NPAS3-203ENST00000357798 CCL7P80098 99 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 GUSBP11Q6P575 273 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 PARLQ9H300 379 aa20.15■□□□□ 0.82
NPAS3-203ENST00000357798 KIAA2026Q5HYC2 2103 aa20.14■□□□□ 0.82
NPAS3-203ENST00000357798 SRP14P37108 136 aaKnown RBP20.14■□□□□ 0.82
NPAS3-203ENST00000357798 SLC38A11Q08AI6 406 aa20.14■□□□□ 0.82
NPAS3-203ENST00000357798 PSMF1Q92530 271 aa20.14■□□□□ 0.82
NPAS3-203ENST00000357798 UBE2L5PA0A1B0GUS4 154 aa20.14■□□□□ 0.81
NPAS3-203ENST00000357798 B4E171 279 aa20.14■□□□□ 0.81
NPAS3-203ENST00000357798 IGKV1D-33P01593 117 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms