RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RNASEK-C17orf49H0YIS7 233 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 M0QYG6 137 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 CD3DP04234 171 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 COX7A1P24310 79 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 HRH1P35367 487 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 CHRFAM7AQ494W8 412 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 FAAP20Q6NZ36 180 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 C1orf122Q6ZSJ8 110 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 OR5AP2Q8NGF4 316 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 LY6G6DO95868 133 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 IL7P13232 177 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 HOXB4P17483 251 aaPredicted RBP20.73■□□□□ 0.91
SSBP3-202ENST00000357475 GATA3P23771 443 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 ARPC4P59998 168 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 HTD2P86397 168 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 PNKDQ8N490 385 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 TINAGL1Q9GZM7 467 aaPredicted RBP20.73■□□□□ 0.91
SSBP3-202ENST00000357475 TMEM133Q9H2Q1 129 aa20.73■□□□□ 0.91
SSBP3-202ENST00000357475 IGHV3OR16-10A0A075B7F0 116 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 TRBV6-7A0A0A0MS04 114 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 A0A1W2PPE3 182 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 ANKRD20A5PA0PJZ0 165 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 ZNF736B4DX44 427 aaPredicted RBP20.72■□□□□ 0.91
SSBP3-202ENST00000357475 GNG10P50151 68 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 TMEM229BQ8NBD8 167 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 LHX4Q969G2 390 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 GNG12Q9UBI6 72 aa20.72■□□□□ 0.91
SSBP3-202ENST00000357475 hCG_1809904A0A1W2PP81 198 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 A0A1W2PPE2 198 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 A0A1W2PR64 198 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 A0A1W2PRD5 423 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 A0A1W2PRF3 423 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 A0A1W2PRM7 423 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 A0A1W2PRV1 198 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 SLC31A2O15432 143 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 CD40LGP29965 261 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 SSBP1Q04837 148 aaKnown RBP20.71■□□□□ 0.91
SSBP3-202ENST00000357475 KLF9Q13886 244 aaPredicted RBP20.71■□□□□ 0.91
SSBP3-202ENST00000357475 CDK10Q15131 360 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 OR10A7Q8NGE5 316 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 OR5H2Q8NGV7 314 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 GSX1Q9H4S2 264 aaPredicted RBP20.71■□□□□ 0.91
SSBP3-202ENST00000357475 UNKLQ9H9P5 680 aaKnown RBP20.71■□□□□ 0.91
SSBP3-202ENST00000357475 JPT1Q9UK76 154 aa20.71■□□□□ 0.91
SSBP3-202ENST00000357475 J3QLI3 93 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 NFYAP23511 347 aaPredicted RBP20.7■□□□□ 0.9
SSBP3-202ENST00000357475 CEACAM6P40199 344 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 ZNF134P52741 427 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 MORN2Q502X0 79 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 KLF17Q5JT82 389 aaPredicted RBP20.7■□□□□ 0.9
SSBP3-202ENST00000357475 OR52M1Q8NGK5 317 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 UPRTQ96BW1 309 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 YAE1D1Q9NRH1 226 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 NECAP2Q9NVZ3 263 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 EHFQ9NZC4 300 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 KCNS2Q9ULS6 477 aa20.7■□□□□ 0.9
SSBP3-202ENST00000357475 A0A087X0M5 115 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 IGHV2-26A0A0B4J1V2 119 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 LINC00854A0A1B0GVQ3 168 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 A0A1B0GX30 115 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 HSPA12AO43301 675 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 CD74P04233 296 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 CSF1P09603 554 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 IGHV4-38-2P0DP08 117 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 TAS2R19P59542 299 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 IFITM3Q01628 133 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 STEAP1BQ6NZ63 245 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 OVCH2Q7RTZ1 564 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 ZNF439Q8NDP4 499 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 OR10J5Q8NHC4 309 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 ABCB10Q9NRK6 738 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 RDH8Q9NYR8 311 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 PSG11Q9UQ72 335 aa20.69■□□□□ 0.9
SSBP3-202ENST00000357475 TRAV40A0A0B4J280 105 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 OR5H8P0DN80 308 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 ZBTB25P24278 435 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 OR3A3P47888 321 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 TAS2R46P59540 309 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 TRIQKQ629K1 86 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 STEAP3Q658P3 488 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 IL17RELQ6ZVW7 336 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 LDLRAD3Q86YD5 345 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 ABHD12Q8N2K0 398 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 GINS4Q9BRT9 223 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 CCDC32Q9BV29 185 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 RAB9BQ9NP90 201 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 F8P00451 2351 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 CENPVL3A0A0U1RRI6 287 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 YPEL1O60688 119 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 FOSL1P15407 271 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 ZNF57Q68EA5 555 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-202ENST00000357475 H1FOOQ8IZA3 346 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-202ENST00000357475 TOMM5Q8N4H5 51 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 OR4C16Q8NGL9 310 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 YPEL2Q96QA6 119 aa20.68■□□□□ 0.9
SSBP3-202ENST00000357475 SONP18583 2426 aaKnown RBP20.67■□□□□ 0.9
SSBP3-202ENST00000357475 RAB3DO95716 219 aa20.67■□□□□ 0.9
SSBP3-202ENST00000357475 CD34P28906 385 aa20.67■□□□□ 0.9
SSBP3-202ENST00000357475 DYRK1AQ13627 763 aa20.67■□□□□ 0.9
SSBP3-202ENST00000357475 CT45A1Q5HYN5 189 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms