RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 OR5A2Q8NGI9 324 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 SSMEM1Q8WWF3 244 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 COX14Q96I36 57 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 MS4A10Q96PG2 267 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 SLC6A13Q9NSD5 602 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 HPRT1P00492 218 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 NMBP08949 121 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 ZIC1Q15915 447 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 TEPPQ6URK8 271 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 PCSK4Q6UW60 755 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 C17orf47Q8NEP4 570 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 MARS2Q96GW9 593 aaKnown RBP4.84□□□□□ -1.63
PTPRD-202ENST00000356435 HILPDAQ9Y5L2 63 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 LTBP1Q14766 1721 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 C9orf170A2RU37 121 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 APELAP0DMC3 54 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 TWIST1Q15672 202 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 PRSS8Q16651 343 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 VN1R4Q7Z5H5 301 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 GAPTQ8N292 157 aa4.84□□□□□ -1.63
PTPRD-202ENST00000356435 PATE3B3GLJ2 98 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF735P0CB33 412 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 MC5RP33032 325 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 SGK494Q96LW2 274 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 SCNM1Q9BWG6 230 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 CBY1Q9Y3M2 126 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 HOXB3P14651 431 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-202ENST00000356435 DYNLT3P51808 116 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 NUTF2P61970 127 aaKnown RBP4.84□□□□□ -1.64
PTPRD-202ENST00000356435 PNRC1Q12796 327 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-202ENST00000356435 DPPA3Q6W0C5 159 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 ABHD3Q8WU67 409 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 ALKBH7Q9BT30 221 aaPredicted RBP4.84□□□□□ -1.64
PTPRD-202ENST00000356435 CHST5Q9GZS9 411 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 ELOVL5Q9NYP7 299 aa4.84□□□□□ -1.64
PTPRD-202ENST00000356435 METTL1Q9UBP6 276 aaKnown RBP4.84□□□□□ -1.64
PTPRD-202ENST00000356435 FOCADQ5VW36 1801 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 H3BVH4 76 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 CTSSP25774 331 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 RELQ04864 619 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 PRSS41Q7RTY9 318 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF519Q8TB69 540 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 JMJD8Q96S16 334 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TOLLIPQ9H0E2 274 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 SH3BGRL3Q9H299 93 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 hCG_38984A0A1B0GV85 526 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 AHRRA9YTQ3 701 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 RPL36A-HNRNPH2H7BZ11 118 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 DHRS2Q13268 280 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 FAM214BQ7L5A3 538 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ALX4Q9H161 411 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 CDRT15L2A8MXV6 281 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 DLL1O00548 723 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 GEMIN2O14893 280 aaKnown RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ZFPL1O95159 310 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 APCSP02743 223 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 CSF2RBP32927 897 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 CDKN2AP42771 156 aaKnown RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 HIST3H3Q16695 136 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 MESTQ5EB52 335 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ATG4DQ86TL0 474 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 OR8D4Q8NGM9 314 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 WNT2BQ93097 391 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 RAB33BQ9H082 229 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 LPAR5Q9H1C0 372 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 MTFP1Q9UDX5 166 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 COLQQ9Y215 455 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ZFP30Q9Y2G7 519 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 DOCK1Q14185 1865 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 IGHV1-45A0A0A0MS14 117 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TCRBV16S1A1N1A0A5B0 115 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM218A2RU14 115 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 FAM157CP0CG43 387 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 REG1BP48304 166 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF137PP52743 207 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF345Q14585 488 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 OR10G8Q8NGN5 311 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 MSL2Q9HCI7 577 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM238LA0A1B0GVL6 79 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 A6NJY4 79 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 FFAR1O14842 300 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 CD81P60033 236 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 MRM1Q6IN84 353 aaKnown RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 OR8A1Q8NGG7 326 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 RPS4Y2Q8TD47 263 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 POM121Q96HA1 1249 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 CCL13Q99616 98 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 PAXXQ9BUH6 204 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 ELOA3CA0A087WX78 387 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 PLPP2O43688 288 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 SCGB1A1P11684 91 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 PRDX2P32119 198 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 CCL8P80075 99 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM30AQ9NV96 361 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TRAV30A0A087WSZ9 112 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TNFSF10P50591 281 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 RAB32Q13637 225 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 PRNTQ86SH4 94 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 J3QR06 171 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms