RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 PMCHP20382 165 aa13.11□□□□□ -0.31
STRN3-201ENST00000355683 HLA-DRB3P79483 266 aa13.11□□□□□ -0.31
STRN3-201ENST00000355683 TBC1D28Q2M2D7 210 aa13.11□□□□□ -0.31
STRN3-201ENST00000355683 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
STRN3-201ENST00000355683 CLN8Q9UBY8 286 aa13.11□□□□□ -0.31
STRN3-201ENST00000355683 KIF26AQ9ULI4 1882 aaPredicted RBP13.1□□□□□ -0.31
STRN3-201ENST00000355683 TGOLN2O43493 480 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 ISG15P05161 165 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 SRD5A2P31213 254 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 LINC00205P59089 165 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 ZNF345Q14585 488 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 TMEM18Q96B42 140 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 ZNF665Q9H7R5 613 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 OR5H1A6NKK0 313 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 RNF224P0DH78 156 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 LSM6P62312 80 aaKnown RBP13.1□□□□□ -0.31
STRN3-201ENST00000355683 NFAM1Q8NET5 270 aaPredicted RBP13.1□□□□□ -0.31
STRN3-201ENST00000355683 PACRGQ96M98 296 aaPredicted RBP13.1□□□□□ -0.31
STRN3-201ENST00000355683 COA4Q9NYJ1 87 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 POMT1Q9Y6A1 747 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 TRANK1O15050 2925 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 REV3LO60673 3130 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 PINLYPA6NC86 204 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 WNT9BO14905 357 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 FCGR3BO75015 233 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 COX6A1P12074 109 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
STRN3-201ENST00000355683 NUFIP2Q7Z417 695 aaKnown RBP13.1□□□□□ -0.31
STRN3-201ENST00000355683 NPTNQ9Y639 398 aa13.1□□□□□ -0.31
STRN3-201ENST00000355683 TRGV5A0A0B4J1U4 118 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 NKX2-8O15522 239 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 CTSDP07339 412 aaPredicted RBP13.09□□□□□ -0.31
STRN3-201ENST00000355683 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 SCCPDHQ8NBX0 429 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 UMODP07911 640 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 SMIM6P0DI80 62 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 TCL1AP56279 114 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 FAM78BQ5VT40 261 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 ACSM6Q6P461 480 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 APOBEC3DQ96AK3 386 aaPredicted RBP13.09□□□□□ -0.31
STRN3-201ENST00000355683 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 CLCF1Q9UBD9 225 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 MYO18BQ8IUG5 2567 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 IRF2P14316 349 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 CPEB3Q8NE35 698 aaKnown RBP13.09□□□□□ -0.31
STRN3-201ENST00000355683 SSMEM1Q8WWF3 244 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 DCTN5Q9BTE1 182 aa13.09□□□□□ -0.31
STRN3-201ENST00000355683 KIAA1324LA8MWY0 1029 aaPredicted RBP13.08□□□□□ -0.31
STRN3-201ENST00000355683 HSPB1P04792 205 aaKnown RBP13.08□□□□□ -0.31
STRN3-201ENST00000355683 CD1AP06126 327 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 FAM3AP98173 230 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 PLGLAQ15195 96 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 FAM27BQ5VT28 67 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 ZNF818PQ6ZRF7 136 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 SSX7Q7RTT5 188 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 MDP1Q86V88 176 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 HIST1H2BAQ96A08 127 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 MRPL13Q9BYD1 178 aaKnown RBP13.08□□□□□ -0.31
STRN3-201ENST00000355683 WNT5BQ9H1J7 359 aa13.08□□□□□ -0.31
STRN3-201ENST00000355683 WIPF3A6NGB9 483 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 TMEM127O75204 238 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 ZNF737O75373 536 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 CD74P04233 296 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 FOSL1P15407 271 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 SUPT4H1P63272 117 aaKnown RBP13.08□□□□□ -0.32
STRN3-201ENST00000355683 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 ZNF573Q86YE8 665 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 FOXJ2Q9P0K8 574 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 TICRRQ7Z2Z1 1910 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 TGIF2-C20orf24A0A0A6YYL0 155 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 IGKV1-12A0A0C4DH73 117 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 IGKV1D-12P01611 117 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 OR8U8P0C7N1 319 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 GALR1P47211 349 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 GNG3P63215 75 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 ZP4Q12836 540 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 TRIP6Q15654 476 aaKnown RBP13.08□□□□□ -0.32
STRN3-201ENST00000355683 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 FAM53AQ6NSI3 398 aaPredicted RBP13.08□□□□□ -0.32
STRN3-201ENST00000355683 FAHD2BQ6P2I3 314 aaPredicted RBP13.08□□□□□ -0.32
STRN3-201ENST00000355683 TMEM251Q8N6I4 163 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 FAHD2AQ96GK7 314 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 DOK5Q9P104 306 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 C2orf16Q68DN1 1984 aa13.08□□□□□ -0.32
STRN3-201ENST00000355683 C17orf112F2Z3M2 114 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 HIST1H3AP68431 136 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 SLC35B1P78383 322 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 OR4A4PQ8NGN8 299 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 ZNF71Q9NQZ8 489 aaPredicted RBP13.07□□□□□ -0.32
STRN3-201ENST00000355683 M0R1X1 148 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 APOA2P02652 100 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 CELA3BP08861 270 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 CCL20P78556 96 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 TMEM252Q8N6L7 170 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 OR52L2PQ8NGH6 319 aa13.07□□□□□ -0.32
STRN3-201ENST00000355683 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms