RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 FAM53AQ6NSI3 398 aaPredicted RBP12.99□□□□□ -0.33
LMX1B-201ENST00000355497 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 KLK13Q9UKR3 277 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 A8MWL6 223 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 RCC1P18754 421 aaPredicted RBP12.99□□□□□ -0.33
LMX1B-201ENST00000355497 HINT1P49773 126 aaPredicted RBP12.99□□□□□ -0.33
LMX1B-201ENST00000355497 SMDT1Q9H4I9 107 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 RRN3P1Q2M238 152 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 TRBV23-1A0A0A0MS06 115 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 REG1BP48304 166 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 OR4D11Q8NGI4 311 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 HSPB9Q9BQS6 159 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 PXMP4Q9Y6I8 212 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 TRAV8-7A0A075B6U6 113 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 MT-ND6P03923 174 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 PSG6Q00889 435 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 FAM216AQ8WUB2 273 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 A0A1W2PPE3 182 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 LGALS3P17931 250 aaKnown RBP12.98□□□□□ -0.33
LMX1B-201ENST00000355497 NUP37Q8NFH4 326 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 NPVFQ9HCQ7 196 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 WIPI2Q9Y4P8 454 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 R4GN57 208 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 RBM11P57052 281 aaKnown RBP12.98□□□□□ -0.33
LMX1B-201ENST00000355497 NAAAQ02083 359 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 MGAT2Q10469 447 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 PLPPR5Q32ZL2 321 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 FADS6Q8N9I5 356 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 HIST1H4GQ99525 98 aa12.98□□□□□ -0.33
LMX1B-201ENST00000355497 PARD6GQ9BYG4 376 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-201ENST00000355497 K7N7A8 449 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 SERF2P84101 59 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 PLAURQ03405 335 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 ISXQ2M1V0 245 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 WDR25Q64LD2 544 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-201ENST00000355497 C16orf92Q96LL3 132 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 SCNM1Q9BWG6 230 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 APOBEC4Q8WW27 367 aaKnown RBP12.97□□□□□ -0.33
LMX1B-201ENST00000355497 A0A1B0GUL6 1792 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 NTN1O95631 604 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 IBA57Q5T440 356 aaKnown RBP12.97□□□□□ -0.33
LMX1B-201ENST00000355497 GMPPAQ96IJ6 420 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-201ENST00000355497 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-201ENST00000355497 GPA33Q99795 319 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 IL36RNQ9UBH0 155 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 PPIAL4EA0A075B759 164 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 C21orf140B9A014 251 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 PPIAL4DF5H284 164 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 PPIAL4FP0DN26 164 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 CKS2P33552 79 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 CYB561D1Q8N8Q1 229 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 DPH3Q96FX2 82 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 HDHD3Q9BSH5 251 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-201ENST00000355497 PPIAL4AQ9Y536 164 aa12.97□□□□□ -0.33
LMX1B-201ENST00000355497 LHX8Q68G74 356 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 ERASQ7Z444 233 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 MDP1Q86V88 176 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 MTURNQ8N3F0 131 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 ZNF441Q8N8Z8 693 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 PCGF1Q9BSM1 259 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 ERVFRD-1P60508 538 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 JOSD1Q15040 202 aaPredicted RBP12.96□□□□□ -0.33
LMX1B-201ENST00000355497 ABHD14BQ96IU4 210 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 METTL26Q96S19 204 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 CLDN14O95500 239 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 CCL3P10147 92 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 EFNB2P52799 333 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 CHRNA10Q9GZZ6 450 aa12.96□□□□□ -0.33
LMX1B-201ENST00000355497 PRSS23O95084 383 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 PRDX2P32119 198 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 GAB4Q2WGN9 574 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 TM4SF20Q53R12 229 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 OR4B1Q8NGF8 309 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 LSM10Q969L4 123 aaKnown RBP12.96□□□□□ -0.34
LMX1B-201ENST00000355497 ZNF714Q96N38 554 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 UCN2Q96RP3 112 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 RPP25Q9BUL9 199 aaKnown RBP12.96□□□□□ -0.34
LMX1B-201ENST00000355497 HSPB7Q9UBY9 170 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 PLA2G10O15496 165 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 FCGR3AP08637 254 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 GFRA1P56159 465 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 OR4A5Q8NH83 315 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 ALG14Q96F25 216 aa12.96□□□□□ -0.34
LMX1B-201ENST00000355497 AMY1AP04745 511 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 MDKP21741 143 aaPredicted RBP12.95□□□□□ -0.34
LMX1B-201ENST00000355497 SLC35B1P78383 322 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 GCSAMLQ5JQS6 135 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 C12orf54Q6X4T0 127 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
LMX1B-201ENST00000355497 LIFP15018 202 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 RPL31P62899 125 aaKnown RBP12.95□□□□□ -0.34
LMX1B-201ENST00000355497 PMCHL1Q16048 86 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 FBXW9Q5XUX1 488 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 TMEM136Q6ZRR5 245 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 EAF1Q96JC9 268 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms