RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 MPPED1O15442 326 aa11.78□□□□□ -0.52
EBF3-201ENST00000355311 TMEM50AO95807 157 aa11.78□□□□□ -0.52
EBF3-201ENST00000355311 AKR1C8PQ5T2L2 129 aa11.78□□□□□ -0.52
EBF3-201ENST00000355311 ZNF826PQ6ZT77 177 aa11.78□□□□□ -0.52
EBF3-201ENST00000355311 CPNE4Q96A23 557 aaPredicted RBP11.78□□□□□ -0.52
EBF3-201ENST00000355311 MALSU1Q96EH3 234 aa11.78□□□□□ -0.52
EBF3-201ENST00000355311 TMEM68Q96MH6 324 aa11.78□□□□□ -0.52
EBF3-201ENST00000355311 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
EBF3-201ENST00000355311 HSPA12AO43301 675 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 WDR1O75083 606 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 TNFSF15O95150 251 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 DANCRP0C864 163 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 LHX2P50458 406 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 PKIAP61925 76 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 SSPNQ14714 243 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 RHEBQ15382 184 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 ZNF664Q8N3J9 261 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 TMEM171Q8WVE6 324 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 KCNS2Q9ULS6 477 aa11.77□□□□□ -0.52
EBF3-201ENST00000355311 AKAP6Q13023 2319 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 IGSF23A1L1A6 192 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 ST8SIA3O43173 380 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 SERPINA7P05543 415 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 CYB561D1Q8N8Q1 229 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 OR5C1Q8NGR4 320 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 HIST1H2AAQ96QV6 131 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 NEU1Q99519 415 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 LUZP4Q9P127 313 aa11.77□□□□□ -0.53
EBF3-201ENST00000355311 CEACAM18A8MTB9 384 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 CHST1O43916 411 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 SYNGR4O95473 234 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 ALDH3B1P43353 468 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 HMGN3Q15651 99 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 DCAF10Q5QP82 559 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 ZNF880Q6PDB4 577 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 APH1AQ96BI3 265 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 ZNF724A8MTY0 619 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 CDIPTO14735 213 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 TK1P04183 234 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 LYL1P12980 280 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 MMP9P14780 707 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 CLDN18P56856 261 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 EIF5AP63241 154 aaKnown RBP11.76□□□□□ -0.53
EBF3-201ENST00000355311 GNMTQ14749 295 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 CNEP1R1Q8N9A8 125 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 OR2G3Q8NGZ4 309 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 HIST1H2BLQ99880 126 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 SF3B5Q9BWJ5 86 aaKnown RBP11.76□□□□□ -0.53
EBF3-201ENST00000355311 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 BMP5P22003 454 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
EBF3-201ENST00000355311 WNT5AP41221 380 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 NKX2-1P43699 371 aaPredicted RBP11.76□□□□□ -0.53
EBF3-201ENST00000355311 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
EBF3-201ENST00000355311 WDR5BQ86VZ2 330 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 LGI3Q8N145 548 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 RFESDQ8TAC1 157 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
EBF3-201ENST00000355311 ZNF703Q9H7S9 590 aaPredicted RBP11.76□□□□□ -0.53
EBF3-201ENST00000355311 BOKQ9UMX3 212 aaPredicted RBP11.76□□□□□ -0.53
EBF3-201ENST00000355311 ABCA4P78363 2273 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 SLC22A20A6NK97 555 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 KIAA1324LA8MWY0 1029 aaPredicted RBP11.75□□□□□ -0.53
EBF3-201ENST00000355311 DEFB108AA8MXU0 73 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 MT-CO3P00414 261 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 PSG2P11465 335 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 DEFA4P12838 97 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 COL8A2P25067 703 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 MEOX1P50221 254 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 ARG2P78540 354 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
EBF3-201ENST00000355311 FAM189A2Q15884 450 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 SLC25A24Q6NUK1 477 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 FOXL2NBQ6ZUU3 175 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 MKXQ8IYA7 352 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 ZDHHC23Q8IYP9 409 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 ZNF808Q8N4W9 903 aaPredicted RBP11.75□□□□□ -0.53
EBF3-201ENST00000355311 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 GLRX2Q9NS18 164 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 WNT9BO14905 357 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 TUSC2O75896 110 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 CCL11P51671 97 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 DYNLT3P51808 116 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 RND3P61587 244 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 C1QL4Q86Z23 238 aa11.75□□□□□ -0.53
EBF3-201ENST00000355311 NUDT16L1Q9BRJ7 211 aaKnown RBP11.75□□□□□ -0.53
EBF3-201ENST00000355311 E5RGE8 158 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 TAAR5O14804 337 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 PCBD1P61457 104 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 VAMP2P63027 116 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 ABLIM2Q6H8Q1 611 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 MDP1Q86V88 176 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 UBALD2Q8IYN6 164 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 IGHV3-43A0A0B4J1X8 118 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 A6NNC1 897 aa11.74□□□□□ -0.53
EBF3-201ENST00000355311 IGHV3-43DP0DP04 118 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 624.1 ms