RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SPINK2P20155 84 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 EPHA8P29322 1005 aaPredicted RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 CDKN1AP38936 164 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 DUSP3P51452 185 aaPredicted RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 RPL19P84098 196 aaKnown RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 EWSR1Q01844 656 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMG6-202ENST00000354901 HSPB9Q9BQS6 159 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 MIEN1Q9BRT3 115 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 DUSP23Q9BVJ7 150 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 CALHM2Q9HA72 323 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 SLC2A9Q9NRM0 540 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 A0A1B0GU03 582 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 ZNF850A8MQ14 1090 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 DHHO43323 396 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 SERPINA7P05543 415 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 HNRNPA3P51991 378 aaKnown RBP8.07□□□□□ -1.12
SMG6-202ENST00000354901 HIST1H3AP68431 136 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 TMEM183BQ1AE95 376 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 VAX1Q5SQQ9 334 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 APH1AQ96BI3 265 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 SRD5A3Q9H8P0 318 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 ST8SIA3O43173 380 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 PHF1O43189 567 aaPredicted RBP8.07□□□□□ -1.12
SMG6-202ENST00000354901 DHRS3O75911 302 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 UMODP07911 640 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 LYL1P12980 280 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 SLC25A53Q5H9E4 307 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 ZNF468Q5VIY5 522 aaPredicted RBP8.07□□□□□ -1.12
SMG6-202ENST00000354901 LYSMD4Q5XG99 296 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 DEFB123Q8N688 67 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 ZNF596Q8TC21 504 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 RNF2Q99496 336 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 ATP5SQ99766 215 aa8.07□□□□□ -1.12
SMG6-202ENST00000354901 A0A0J9YW62 118 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 B4GALT1P15291 398 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 CCKARP32238 428 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 CNN1P51911 297 aaKnown RBP8.06□□□□□ -1.12
SMG6-202ENST00000354901 RSPO1Q2MKA7 263 aaPredicted RBP8.06□□□□□ -1.12
SMG6-202ENST00000354901 HLA-BQ31612 363 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 TMEM9BQ9NQ34 198 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 IL19Q9UHD0 177 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 OSGIN2Q9Y236 505 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 LY6G6EA0A0G2JKS1 128 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 KIR2DL5BA0A0G2JN68 375 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 KIR2DL5BA0A0G2JPC4 375 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 PATE3B3GLJ2 98 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 CDKN1BP46527 198 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 TAS2R46P59540 309 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 RPS18P62269 152 aaKnown RBP8.06□□□□□ -1.12
SMG6-202ENST00000354901 PCOLCEQ15113 449 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 FAM78BQ5VT40 261 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 C9orf135Q5VTT2 229 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 CRIP3Q6Q6R5 217 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 SLC25A26Q70HW3 274 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 TCF23Q7RTU1 214 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 WFDC8Q8IUA0 241 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 KIR2DL5AQ8N109 375 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 EMG1Q92979 244 aaKnown RBP8.06□□□□□ -1.12
SMG6-202ENST00000354901 PLSCR2Q9NRY7 297 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 U3KQA8 63 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 NKX6-3A6NJ46 265 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 DYNLT3P51808 116 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 ZNF154Q13106 437 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 KCNMB1Q16558 191 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 OR11L1Q8NGX0 322 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 CLDND2Q8NHS1 167 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 CMTM2Q8TAZ6 248 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 FBLN5Q9UBX5 448 aa8.06□□□□□ -1.12
SMG6-202ENST00000354901 TNRC6BQ9UPQ9 1833 aaKnown RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 A0A0G2JMM0 328 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 A0A1W2PPB8 328 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 A0A1W2PRS3 328 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 KIR3DP1A8MWS1 328 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 ETV2O00321 342 aaPredicted RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 HSPB1P04792 205 aaKnown RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 GCH1P30793 250 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 NKX2-1P43699 371 aaPredicted RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 ZXDAP98168 799 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 HIST3H3Q16695 136 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 ZCCHC14Q8WYQ9 949 aaKnown RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 RSG1Q9BU20 258 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 SRXN1Q9BYN0 137 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 CDH20Q9HBT6 801 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 TRAPPC1Q9Y5R8 145 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 LRRC3CA6NJW4 275 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 ZIC3O60481 467 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 MRPL49Q13405 166 aaKnown RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 ARL6IP1Q15041 203 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 PIGYQ3MUY2 71 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 SPIN3Q5JUX0 258 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 PEAR1Q5VY43 1037 aaPredicted RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 LHFPL1Q86WI0 220 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 FADS6Q8N9I5 356 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 IFI44Q8TCB0 444 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 RTN4IP1Q8WWV3 396 aaPredicted RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 DIDO1Q9BTC0 2240 aaKnown RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 IGSF23A1L1A6 192 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 F6UZH7 168 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms