RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MPZP25189 248 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 HOXD3P31249 432 aaPredicted RBP9.09□□□□□ -0.95
RTN3-204ENST00000354497 UBE2E1P51965 193 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 CDC42P60953 191 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 NCR3LG1Q68D85 454 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 SLC36A1Q7Z2H8 476 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 GJC3Q8NFK1 279 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 LRRC29Q8WV35 223 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 ARL11Q969Q4 196 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 SMIM8Q96KF7 97 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 POLR2J2Q9GZM3 115 aaKnown RBP9.09□□□□□ -0.95
RTN3-204ENST00000354497 POLR2J3Q9H1A7 115 aaKnown RBP9.09□□□□□ -0.95
RTN3-204ENST00000354497 ZNF702PQ9H963 129 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 PLEKHA1Q9HB21 404 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 KRCC1Q9NPI7 259 aaPredicted RBP9.09□□□□□ -0.95
RTN3-204ENST00000354497 KAAG1Q9UBP8 84 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 SF3B6Q9Y3B4 125 aaKnown RBP9.09□□□□□ -0.95
RTN3-204ENST00000354497 NOTCH3Q9UM47 2321 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.08□□□□□ -0.96
RTN3-204ENST00000354497 CD300LBA8K4G0 201 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 K7EP13 123 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 ANGPTL7O43827 346 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 OR2F2O95006 317 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 MTNR1BP49286 362 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 BLOC1S1P78537 153 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 OR2F1Q13607 317 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 TRAM1Q15629 374 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 PCK2Q16822 640 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 LRRC10Q5BKY1 277 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 TEX36Q5VZQ5 186 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 DRAM2Q6UX65 266 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 GLDNQ6ZMI3 551 aaPredicted RBP9.08□□□□□ -0.96
RTN3-204ENST00000354497 LINC00346Q8IVM7 164 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 NRMQ8IXM6 262 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 TMEM185AQ8NFB2 350 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 RNASEH2CQ8TDP1 164 aaKnown RBP9.08□□□□□ -0.96
RTN3-204ENST00000354497 TNFRSF14Q92956 283 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 TMEM208Q9BTX3 173 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 ALG8Q9BVK2 526 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 ARL6Q9H0F7 186 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 RHCGQ9UBD6 479 aa9.08□□□□□ -0.96
RTN3-204ENST00000354497 RPL36Q9Y3U8 105 aaKnown RBP9.08□□□□□ -0.96
RTN3-204ENST00000354497 DYNC2H1Q8NCM8 4307 aaKnown RBP9.08□□□□□ -0.96
RTN3-204ENST00000354497 OGG1O15527 345 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 TGOLN2O43493 480 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 BPNT1O95861 308 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 CD14P08571 375 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 FAHP16930 419 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 RAB5AP20339 215 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 FGF7P21781 194 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 G0S2P27469 103 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 GPR4P46093 362 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 CRYBA2P53672 197 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 AP3S2P59780 193 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 COL10A1Q03692 680 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 ST3GAL3Q11203 375 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 VMACQ2NL98 169 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 LIPKQ5VXJ0 399 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 ZNF626Q68DY1 528 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 ZFP82Q8N141 532 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 KCNRGQ8N5I3 272 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 SDR9C7Q8NEX9 313 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 OR13D1Q8NGV5 346 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 OR4Q3Q8NH05 313 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 OR8S1Q8NH09 359 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 OR2AE1Q8NHA4 323 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 DPF1Q92782 380 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 SEH1LQ96EE3 360 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 RHOVQ96L33 236 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 SERTAD4Q9NUC0 356 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 LHFPL6Q9Y693 200 aa9.07□□□□□ -0.96
RTN3-204ENST00000354497 NKX6-3A6NJ46 265 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 OR2AT4A6NND4 320 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 M0R143 59 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 SIX6O95475 246 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 GSTP1P09211 210 aaKnown RBP9.06□□□□□ -0.96
RTN3-204ENST00000354497 HTR2CP28335 458 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 EPHA2P29317 976 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 NPBWR1P48145 328 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 PPT1P50897 306 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 MZT1Q08AG7 82 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 LPCAT3Q6P1A2 487 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 COLCA1Q6ZS62 124 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 CBLL1Q75N03 491 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 WFDC9Q8NEX5 89 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 OR2D3Q8NGH3 330 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 OR52N4Q8NGI2 321 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 TERB2Q8NHR7 220 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 HAVCR2Q8TDQ0 301 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 CORO2AQ92828 525 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 RCC1LQ96I51 464 aaKnown RBP9.06□□□□□ -0.96
RTN3-204ENST00000354497 TPD52L3Q96J77 140 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 RCC2Q9P258 522 aaKnown RBP9.06□□□□□ -0.96
RTN3-204ENST00000354497 U3KQK5 164 aa9.06□□□□□ -0.96
RTN3-204ENST00000354497 ZAR1LA6NP61 321 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 C3orf84H3BNL1 204 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 BHLHE40O14503 412 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 NXPH2O95156 264 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 LHBP01229 141 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 TFF1P04155 84 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms