RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 IGHV3-43DP0DP04 118 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 CDKN1AP38936 164 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 H2BFSP57053 126 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 CR1LQ2VPA4 569 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 DCAF12L2Q5VW00 463 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 FAM53AQ6NSI3 398 aaPredicted RBP17.04■□□□□ 0.32
TRIM4-202ENST00000354241 NOXA1Q86UR1 476 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 OR2S2Q9NQN1 319 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 KCNIP3Q9Y2W7 256 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 HRNRQ86YZ3 2850 aaPredicted RBP17.04■□□□□ 0.32
TRIM4-202ENST00000354241 TRGV10A0A0A0MS01 117 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 NDUFB3O43676 98 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 RP2O75695 350 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 C1QBP02746 253 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 GIPP09681 153 aaPredicted RBP17.04■□□□□ 0.32
TRIM4-202ENST00000354241 WDR89Q96FK6 387 aaPredicted RBP17.04■□□□□ 0.32
TRIM4-202ENST00000354241 PIPOXQ9P0Z9 390 aa17.04■□□□□ 0.32
TRIM4-202ENST00000354241 DAOP14920 347 aa17.03■□□□□ 0.32
TRIM4-202ENST00000354241 PPP1CCP36873 323 aaKnown RBP17.03■□□□□ 0.32
TRIM4-202ENST00000354241 SRSF1Q07955 248 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRIM4-202ENST00000354241 FAM185AQ8N0U4 392 aa17.03■□□□□ 0.32
TRIM4-202ENST00000354241 CALYQ9NYX4 217 aa17.03■□□□□ 0.32
TRIM4-202ENST00000354241 CTSZQ9UBR2 303 aa17.03■□□□□ 0.32
TRIM4-202ENST00000354241 KCNS2Q9ULS6 477 aa17.03■□□□□ 0.32
TRIM4-202ENST00000354241 A0A0B4J2A0 478 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 NDUFA2O43678 99 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 GOSR1O95249 250 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 OR5AC1P0C628 307 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 OR8U9P0C7N5 309 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 HTD2P86397 168 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 SP6Q3SY56 376 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 LRRC10Q5BKY1 277 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 LY6G6FQ5SQ64 297 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 AVPI1Q5T686 147 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 OR5M8Q8NGP6 311 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 OR2T35Q8NGX2 323 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 OR8U1Q8NH10 309 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 SPOCK3Q9BQ16 436 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 SHPKQ9UHJ6 478 aa17.02■□□□□ 0.32
TRIM4-202ENST00000354241 FAM25EA8MYX2 175 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 MPPED1O15442 326 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 OR2A4O95047 310 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 TBC1D26Q86UD7 250 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 CMTM1Q8IZ96 169 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 OR2A7Q96R45 310 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 GPHA2Q96T91 129 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 KAAG1Q9UBP8 84 aa17.02■□□□□ 0.31
TRIM4-202ENST00000354241 DBX1A6NMT0 343 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 DVL1O14640 695 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 TNFSF12O43508 249 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 FCN3O75636 299 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 IGHV2-70P01814 119 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 OMGP23515 440 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 RAP2BP61225 183 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 RND3P61587 244 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 TCF23Q7RTU1 214 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 H1FXQ92522 213 aaKnown RBP17.01■□□□□ 0.31
TRIM4-202ENST00000354241 PDCD10Q9BUL8 212 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 DOPEY1Q5JWR5 2465 aa17.01■□□□□ 0.31
TRIM4-202ENST00000354241 hADV38S2A0JD32 116 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 PHF1O43189 567 aaPredicted RBP17■□□□□ 0.31
TRIM4-202ENST00000354241 C17orf58Q2M2W7 97 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 GALNT14Q96FL9 552 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 TOLLIPQ9H0E2 274 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 RAB9BQ9NP90 201 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 GNG12Q9UBI6 72 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 ITGB1BP2Q9UKP3 347 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 C3orf85A0A1B0GTC6 90 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 ADAP1O75689 374 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 CGB3P0DN86 165 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 CGB7P0DN87 165 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 DNASE1P24855 282 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 S100GP29377 79 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 GZMKP49863 264 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 RPL31P62899 125 aaKnown RBP17■□□□□ 0.31
TRIM4-202ENST00000354241 MRPS11P82912 194 aaKnown RBP17■□□□□ 0.31
TRIM4-202ENST00000354241 TMEM187Q14656 261 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 BVESQ8NE79 360 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 RANBP3Q9H6Z4 567 aaPredicted RBP17■□□□□ 0.31
TRIM4-202ENST00000354241 C19orf12Q9NSK7 152 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 JPT1Q9UK76 154 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 RNF150Q9ULK6 438 aa17■□□□□ 0.31
TRIM4-202ENST00000354241 KBTBD11-OT1A0A1B0GTJ5 212 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 C13orf42A0A1B0GVH6 325 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 C5orf51A6NDU8 294 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 F2RL2O00254 374 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 PPIHO43447 177 aaKnown RBP16.99■□□□□ 0.31
TRIM4-202ENST00000354241 HLA-GP17693 338 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 TLE4Q04727 773 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 SEC22AQ96IW7 307 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 TP53RKQ96S44 253 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 SUCNR1Q9BXA5 334 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 METTL8Q9H825 291 aaKnown RBP16.99■□□□□ 0.31
TRIM4-202ENST00000354241 RAB18Q9NP72 206 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 CLN8Q9UBY8 286 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 LRBAP50851 2863 aa16.99■□□□□ 0.31
TRIM4-202ENST00000354241 YLPM1P49750 1951 aaKnown RBP16.98■□□□□ 0.31
TRIM4-202ENST00000354241 ZNF729A6NN14 1252 aaPredicted RBP16.98■□□□□ 0.31
TRIM4-202ENST00000354241 PGLYRP1O75594 196 aaPredicted RBP16.98■□□□□ 0.31
TRIM4-202ENST00000354241 FSTL3O95633 263 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms