RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 IL36RNQ9UBH0 155 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ATP23Q9Y6H3 246 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 NOTCH3Q9UM47 2321 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 DNAH3Q8TD57 4116 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 TRAV24A0A0B4J272 114 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 RNF222A6NCQ9 220 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 C5orf51A6NDU8 294 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 TRDCB7Z8K6 153 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 DEGS1O15121 323 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 BCL2L11O43521 198 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 WNT2P09544 360 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 PET100P0DJ07 73 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 PI3P19957 117 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 HNF1AP20823 631 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 FCGR2CP31995 323 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 MPV17P39210 176 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 HERV-K104P61576 105 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 SRPXP78539 464 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 HLA-DRB3P79483 266 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 NAAAQ02083 359 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 ZNF154Q13106 437 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 SLC9A3R2Q15599 337 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 TSC22D1Q15714 1073 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 ESCO2Q56NI9 601 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 BEX5Q5H9J7 111 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 PRSS54Q6PEW0 395 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 FIP1L1Q6UN15 594 aaKnown RBP6.87□□□□□ -1.31
CD44-205ENST00000352818 ACOT7LQ6ZUV0 252 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 KCTD9Q7L273 389 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 SSX8Q7RTT4 187 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 SLC51BQ86UW2 128 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 OR4A4PQ8NGN8 299 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 THAP6Q8TBB0 222 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 SYT3Q9BQG1 590 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 WDR13Q9H1Z4 485 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 SEBOXQ9HB31 216 aaPredicted RBP6.87□□□□□ -1.31
CD44-205ENST00000352818 TMEM100Q9NV29 134 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 RASL12Q9NYN1 266 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 DNAJB11Q9UBS4 358 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 KIF25Q9UIL4 384 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 TENM2Q9NT68 2774 aa6.87□□□□□ -1.31
CD44-205ENST00000352818 TEX13DA0A0J9YY54 714 aaPredicted RBP6.86□□□□□ -1.31
CD44-205ENST00000352818 ANKRD34BA5PLL1 514 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 MLNRO43193 412 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 RHBDL1O75783 438 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 PTBP3O95758 552 aaKnown RBP6.86□□□□□ -1.31
CD44-205ENST00000352818 CFDP00746 253 aaPredicted RBP6.86□□□□□ -1.31
CD44-205ENST00000352818 PPYP01298 95 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 TK1P04183 234 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 AADACP22760 399 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 ZFP36P26651 326 aaKnown RBP6.86□□□□□ -1.31
CD44-205ENST00000352818 GCH1P30793 250 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 CD200P41217 278 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 KCNJ3P48549 501 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 AP2S1P53680 142 aaPredicted RBP6.86□□□□□ -1.31
CD44-205ENST00000352818 PIGPP57054 158 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 PAX5Q02548 391 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 TMEM187Q14656 261 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 HERPUD1Q15011 391 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 PDCD1Q15116 288 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 ALKBH6Q3KRA9 238 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 ABCA11PQ4W5N1 156 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 ADAM5Q6NVV9 412 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 BRICD5Q6PL45 260 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 ZNF497Q6ZNH5 498 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 ZNF525Q8N782 197 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 SCARB1Q8WTV0 552 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 RTN4IP1Q8WWV3 396 aaPredicted RBP6.86□□□□□ -1.31
CD44-205ENST00000352818 PHYHIPLQ96FC7 376 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 PLPPR2Q96GM1 343 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 SEC22AQ96IW7 307 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 SLC2A9Q9NRM0 540 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 MED9Q9NWA0 146 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 RDH8Q9NYR8 311 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 MBD2Q9UBB5 411 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 PCDHB10Q9UN67 800 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 KCNIP3Q9Y2W7 256 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 SPEF1Q9Y4P9 236 aa6.86□□□□□ -1.31
CD44-205ENST00000352818 PIGBOS1A0A0B4J2F0 54 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 DUXBA0A1W2PPF3 345 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 KANTRA0A1W2PQU2 76 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 FAM25EA8MYX2 175 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 SLC33A1O00400 549 aaPredicted RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 SH2D1BO14796 132 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 TIMM8AO60220 97 aaPredicted RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 ADAP1O75689 374 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 NXPH2O95156 264 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 OR2H2O95918 312 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 KNG1P01042 644 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 IFNA21P01568 189 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 ZNF44P15621 663 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 ZNF250P15622 560 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 USF1P22415 310 aaPredicted RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 LMO1P25800 156 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 CFHR2P36980 270 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 RAB14P61106 215 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 RPS23P62266 143 aaKnown RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 PAN3Q58A45 887 aaKnown RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 RGS7BPQ6MZT1 257 aaPredicted RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 LIAT1Q6ZQX7 453 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms