RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PRNDQ9UKY0 176 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 SHISA3A0PJX4 238 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 FAM157CP0CG43 387 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 NPY1RP25929 384 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 P2RY4P51582 365 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 ANKRD55Q3KP44 614 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 ZNF826PQ6ZT77 177 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 OR11H4Q8NGC9 324 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 ANAPC16Q96DE5 110 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 ABHD14BQ96IU4 210 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 TNFRSF19Q9NS68 423 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 PIPOXQ9P0Z9 390 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 C16orf97H3BN30 126 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 MUC1P15941 1255 aaPredicted RBP13.86□□□□□ -0.19
PTPN11-201ENST00000351677 CCL8P80075 99 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 IGLV3-21P80748 117 aaPredicted RBP13.86□□□□□ -0.19
PTPN11-201ENST00000351677 SRD5A3Q9H8P0 318 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 COA4Q9NYJ1 87 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 NEURL1O76050 574 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 COX6A1P12074 109 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 CEBPDP49716 269 aaPredicted RBP13.86□□□□□ -0.19
PTPN11-201ENST00000351677 STARD6P59095 220 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 C19orf57Q0VDD7 668 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 GABRA6Q16445 453 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 INSIG2Q9Y5U4 225 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 ZNF236Q9UL36 1845 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 IGHV3-21A0A0B4J1V1 117 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 LOC101059948A0A1B0GTJ6 334 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 TCAPO15273 167 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 OR2H2O95918 312 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 CEP290O15078 2479 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 MMP7P09237 267 aaPredicted RBP13.85□□□□□ -0.19
PTPN11-201ENST00000351677 SPCS3P61009 180 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 NSUN5P2Q63ZY6 315 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 OR4X1Q8NH49 305 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 C1QL1O75973 258 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 HBZP02008 142 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 IFITM2Q01629 132 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 Q5BKY6 102 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 CDCP2Q5VXM1 449 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 FAM214BQ7L5A3 538 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 NHLRC2Q8NBF2 726 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 PRR7Q8TB68 274 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 H2BFSP57053 126 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 GUCA2BQ16661 112 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 RNF2Q99496 336 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 AICDAQ9GZX7 198 aa13.85□□□□□ -0.19
PTPN11-201ENST00000351677 ERVH48-1M5A8F1 160 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 CRISP2P16562 243 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 USF1P22415 310 aaPredicted RBP13.84□□□□□ -0.19
PTPN11-201ENST00000351677 ASCL3Q9NQ33 180 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 FUT9Q9Y231 359 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 IGKV3-11P04433 115 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 MRPL30Q8TCC3 161 aaKnown RBP13.84□□□□□ -0.19
PTPN11-201ENST00000351677 NPAS1Q99742 590 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 RSG1Q9BU20 258 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 A0A1W2PR77 199 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 J3QR06 171 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 SRSF10O75494 262 aaKnown RBP13.84□□□□□ -0.19
PTPN11-201ENST00000351677 CSN3P07498 182 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 WDR73Q6P4I2 378 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 DNASE2BQ8WZ79 361 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 OR10C1Q96KK4 312 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 SLC25A10Q9UBX3 287 aaPredicted RBP13.84□□□□□ -0.19
PTPN11-201ENST00000351677 HSF4Q9ULV5 492 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 B4DEV8 164 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 AMTP48728 403 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 TGIF1Q15583 401 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 NPTNQ9Y639 398 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 GNG7O60262 68 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 RPL29P47914 159 aaKnown RBP13.84□□□□□ -0.19
PTPN11-201ENST00000351677 NHLH1Q02575 133 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 PCOLCEQ15113 449 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 RSPO4Q2I0M5 234 aaPredicted RBP13.84□□□□□ -0.19
PTPN11-201ENST00000351677 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 CCL13Q99616 98 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 UBTD1Q9HAC8 227 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 OR51B2Q9Y5P1 312 aa13.84□□□□□ -0.19
PTPN11-201ENST00000351677 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.19
PTPN11-201ENST00000351677 CTXND1A0A1B0GTU2 59 aa13.83□□□□□ -0.19
PTPN11-201ENST00000351677 RPL31P62899 125 aaKnown RBP13.83□□□□□ -0.19
PTPN11-201ENST00000351677 UBE2V2Q15819 145 aa13.83□□□□□ -0.19
PTPN11-201ENST00000351677 CXorf66Q5JRM2 361 aaPredicted RBP13.83□□□□□ -0.19
PTPN11-201ENST00000351677 MRPL54Q6P161 138 aaKnown RBP13.83□□□□□ -0.19
PTPN11-201ENST00000351677 TMEM252Q8N6L7 170 aa13.83□□□□□ -0.19
PTPN11-201ENST00000351677 OR1L6Q8NGR2 347 aa13.83□□□□□ -0.19
PTPN11-201ENST00000351677 WNT5AP41221 380 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 NAAAQ02083 359 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 SDHCQ99643 169 aaPredicted RBP13.83□□□□□ -0.2
PTPN11-201ENST00000351677 KLF4O43474 513 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 OR5AL1P0C617 328 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 C10orf113Q5VZT2 155 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 TMEM222Q9H0R3 208 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 SULT1A2P50226 295 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 TMEM183BQ1AE95 376 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 NRIP2Q9BQI9 281 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 ACP1P24666 158 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 OR2V2Q96R30 315 aa13.83□□□□□ -0.2
PTPN11-201ENST00000351677 NPDC1Q9NQX5 325 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms