RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 UPK1BO75841 260 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 PRRX1P54821 245 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 LOXL3P58215 753 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 ARFRP1Q13795 201 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 HMGN3Q15651 99 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 ZNF260Q3ZCT1 412 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 HACD4Q5VWC8 232 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 FAM131AQ6UXB0 335 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 Q6ZPA2 131 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 GDPD1Q8N9F7 314 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 BEND2Q8NDZ0 799 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 OR1L1Q8NH94 360 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 ZNF596Q8TC21 504 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 Q9N2K0 584 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 CUBNO60494 3623 aa11.33□□□□□ -0.6
SEC13-202ENST00000350697 TRAV18A0A075B6X5 111 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 FAM25AB3EWG3 89 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 FAM25CB3EWG5 89 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 FAM25GB3EWG6 89 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 TOR1AO14656 332 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 APOA1P02647 267 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 FCGR3AP08637 254 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 PITPNAQ00169 270 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 PNLIPRP3Q17RR3 467 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 MINOS1Q5TGZ0 78 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 OR4P4Q8NGL7 312 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 GALMQ96C23 342 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 AJUBAQ96IF1 538 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 PSG11Q9UQ72 335 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 MINOS1-NBL1R4GNA1 71 aa11.32□□□□□ -0.6
SEC13-202ENST00000350697 IGHV3-43A0A0B4J1X8 118 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 J3QR06 171 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 XRCC3O43542 346 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 IGHV3-43DP0DP04 118 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 HTR1DP28221 377 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 GNG2P59768 71 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 HLA-DRB3P79483 266 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 HTD2P86397 168 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 BAMBIQ13145 260 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 HLA-DRB5Q30154 266 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 Q3ZCU0 254 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 UTF1Q5T230 341 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 Q6YL49 198 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 LDLRAD3Q86YD5 345 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 C15orf40Q8WUR7 153 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 C17orf50Q8WW18 174 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 LEAP2Q969E1 77 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 CREB3L1Q96BA8 519 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 MALSU1Q96EH3 234 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 MIXL1Q9H2W2 232 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 OR2S2Q9NQN1 319 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 ZNRD1Q9P1U0 126 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 JPT1Q9UK76 154 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 ELF5Q9UKW6 265 aaPredicted RBP11.31□□□□□ -0.6
SEC13-202ENST00000350697 V9GYH0 126 aa11.31□□□□□ -0.6
SEC13-202ENST00000350697 TRDCB7Z8K6 153 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 HPGDSO60760 199 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 TPPPO94811 219 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 VENTXO95231 258 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 IGHV3-7P01780 117 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 EIF4EP06730 217 aaKnown RBP11.3□□□□□ -0.6
SEC13-202ENST00000350697 MELTFP08582 738 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 DTYMKP23919 212 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 MNDAP41218 407 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 KIR2DS4P43632 304 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 GNG10P50151 68 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 KIR2DS1Q14954 304 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 SRSF7Q16629 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEC13-202ENST00000350697 STEAP3Q658P3 488 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 CNIH2Q6PI25 160 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 C5orf24Q7Z6I8 188 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 C8orf31Q8N9H6 132 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 SSMEM1Q8WWF3 244 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 MMP28Q9H239 520 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 AUNIPQ9H7T9 357 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 DPM3Q9P2X0 92 aa11.3□□□□□ -0.6
SEC13-202ENST00000350697 AMMECR1Q9Y4X0 333 aaPredicted RBP11.3□□□□□ -0.6
SEC13-202ENST00000350697 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 LEUTXA8MZ59 168 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 BUB1B-PAK6H3BSN5 160 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 HOXA3O43365 443 aaPredicted RBP11.29□□□□□ -0.6
SEC13-202ENST00000350697 ELK1P19419 428 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 CEACAM3P40198 252 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 TRIM16LQ309B1 348 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 TMEM69Q5SWH9 247 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 LDLRAD2Q5SZI1 272 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 Q6ZS49 121 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 IZUMO1Q8IYV9 350 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 LINC00311Q8N616 119 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 ZDHHC22Q8N966 263 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
SEC13-202ENST00000350697 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms