RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TMEM267Q0VDI3 215 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-203ENST00000349748 LY6G5CQ5SRR4 150 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 C6orf201Q7Z4U5 140 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 OR2Y1Q8NGV0 311 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 LHX4Q969G2 390 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF501Q96CX3 271 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-203ENST00000349748 GPER1Q99527 375 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 TM2D1Q9BX74 207 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 SNRNP200O75643 2136 aaKnown RBP9.15□□□□□ -0.94
CAPN3-203ENST00000349748 IFNA1P01562 189 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 ISG15P05161 165 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 CELA3BP08861 270 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 EGR4Q05215 589 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 MGAT2Q10469 447 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 ZP4Q12836 540 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 DEFB134Q4QY38 66 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 C1QL2Q7Z5L3 287 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 VASH2Q86V25 355 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 UBALD2Q8IYN6 164 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 FAM19A2Q8N3H0 131 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 IRF7Q92985 503 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF524Q96C55 264 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF48Q96MX3 618 aaPredicted RBP9.15□□□□□ -0.95
CAPN3-203ENST00000349748 GPHA2Q96T91 129 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 FBLN5Q9UBX5 448 aa9.15□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF850A8MQ14 1090 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 CHST1O43916 411 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 PRKNO60260 465 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-203ENST00000349748 NUDT3O95989 172 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 ASAH2BP0C7U1 165 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 GPR1P46091 355 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 ARF3P61204 181 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-203ENST00000349748 ARF1P84077 181 aaKnown RBP9.14□□□□□ -0.95
CAPN3-203ENST00000349748 PLPPR5Q32ZL2 321 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 KIAA0895LQ68EN5 471 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 OR5D14Q8NGL3 314 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 RCHY1Q96PM5 261 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 ATP6V0BQ99437 205 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 LRFN3Q9BTN0 628 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 GNB4Q9HAV0 340 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 SHANK1Q9Y566 2161 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 LATO43561 262 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 IFNA5P01569 189 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 GNRHRP30968 328 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 YPEL3P61236 119 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-203ENST00000349748 ACKR1Q16570 336 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 ATG4DQ86TL0 474 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-203ENST00000349748 C20orf196Q8IYI0 205 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 PNKDQ8N490 385 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 ARHGEF39Q8N4T4 335 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 LIN37Q96GY3 246 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-203ENST00000349748 SIGLEC12Q96PQ1 595 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 POLR1DQ9Y2S0 133 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 PCNX3Q9H6A9 2034 aa9.14□□□□□ -0.95
CAPN3-203ENST00000349748 NOTCH4Q99466 2003 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 CXorf51AA0A1B0GTR3 108 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 KIAA1324LA8MWY0 1029 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-203ENST00000349748 ALG1L2C9J202 215 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 IGLL1P15814 213 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 S100GP29377 79 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 MDH2P40926 338 aaKnown RBP9.13□□□□□ -0.95
CAPN3-203ENST00000349748 COMMD2Q86X83 199 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 OR4C3Q8NH37 302 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 OR5B3Q8NH48 314 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 OR5P3Q8WZ94 311 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 DDIT4LQ96D03 193 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 RPP25Q9BUL9 199 aaKnown RBP9.13□□□□□ -0.95
CAPN3-203ENST00000349748 COA3Q9Y2R0 106 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-203ENST00000349748 ADAM20O43506 726 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 MT-CO2P00403 227 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 IGLC1P0CG04 106 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 KITLGP21583 273 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 FUT6P51993 359 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 OR5AS1Q8N127 324 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF114Q8NC26 417 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 TMEM52Q8NDY8 209 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 SFRP2Q96HF1 295 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 HEBP2Q9Y5Z4 205 aa9.13□□□□□ -0.95
CAPN3-203ENST00000349748 IGLV1-36A0A0B4J1U3 117 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 PRSS37A4D1T9 235 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 ANOS1P23352 680 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 NPPCP23582 126 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 GATA2P23769 480 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-203ENST00000349748 BAXQ07812 192 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 SLAQ13239 276 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 DGAT2L6Q6ZPD8 337 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 SLC38A9Q8NBW4 561 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 OR51E1Q8TCB6 317 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 C11orf40Q8WZ69 217 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 NAT6Q93015 286 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 KLHDC7BQ96G42 594 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 ECI1P42126 302 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 PSMB3P49720 205 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF141Q15928 474 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF77Q15935 545 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 EMC4Q5J8M3 183 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 STUMQ69YW2 141 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms