RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ABHD17BQ5VST6 288 aa15.35■□□□□ 0.05
PTP4A3-202ENST00000349124 CDPF1Q6NVV7 123 aa15.35■□□□□ 0.05
PTP4A3-202ENST00000349124 TCTEX1D2Q8WW35 142 aa15.35■□□□□ 0.05
PTP4A3-202ENST00000349124 RBM7Q9Y580 266 aaKnown RBP15.35■□□□□ 0.05
PTP4A3-202ENST00000349124 MT-CO3P00414 261 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 RAB11AP62491 216 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 HLA-DRB3P79483 266 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 STX12Q86Y82 276 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 WDR1O75083 606 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 CEACAM1P13688 526 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 TLE4Q04727 773 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 PLP2Q04941 152 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 ALKBH6Q3KRA9 238 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 ZNF585BQ52M93 769 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 SPNS3Q6ZMD2 512 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 WDR86Q86TI4 376 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 OR10V1Q8NGI7 309 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 POM121Q96HA1 1249 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 SMDT1Q9H4I9 107 aa15.34■□□□□ 0.05
PTP4A3-202ENST00000349124 DUXBA0A1W2PPF3 345 aa15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 HSPB1P04792 205 aaKnown RBP15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 ERVS71-1P61550 626 aa15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 GNG3P63215 75 aa15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 GFI1BQ5VTD9 330 aa15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 ABHD14BQ96IU4 210 aa15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 CDX2Q99626 313 aaPredicted RBP15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 NIPSNAP3BQ9BS92 247 aa15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 DOK5Q9P104 306 aa15.33■□□□□ 0.05
PTP4A3-202ENST00000349124 BTBD17A6NE02 478 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 IL18BPO95998 194 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 IFNA5P01569 189 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 CELA3BP08861 270 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 PLGLB1Q02325 96 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 PDZD11Q5EBL8 140 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 Q6P435 159 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 ZNF573Q86YE8 665 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 TVP23CQ96ET8 276 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 OR51I2Q9H344 312 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 KCNS2Q9ULS6 477 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 ARHGAP21Q5T5U3 1957 aa15.33■□□□□ 0.04
PTP4A3-202ENST00000349124 A0A1B0GU03 582 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 MMP9P14780 707 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 CEBPDP49716 269 aaPredicted RBP15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 BEND4Q6ZU67 534 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 PSENENQ9NZ42 101 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 RNF150Q9ULK6 438 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 SPENQ96T58 3664 aaKnown RBP15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 CYB5BO43169 146 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 SYNGR2O43760 224 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 TRGC2P03986 189 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 ZNF880Q6PDB4 577 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 MDP1Q86V88 176 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 IL22RA2Q969J5 263 aa15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 TNRC6BQ9UPQ9 1833 aaKnown RBP15.32■□□□□ 0.04
PTP4A3-202ENST00000349124 LOC102723971A0A1B0GUV8 181 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 HMGB3O15347 200 aaKnown RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 TFF1P04155 84 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 COX5BP10606 129 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 MDKP21741 143 aaPredicted RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 APLNRP35414 380 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 ARR3P36575 388 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 RPS16P62249 146 aaKnown RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 CLN3Q13286 438 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 SPANXN5Q5MJ07 72 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 PEAR1Q5VY43 1037 aaPredicted RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 FAM90A2PQ658T7 463 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 C1QL4Q86Z23 238 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 OR8G5Q8NG78 346 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 GGACTQ9BVM4 153 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 DEFB127Q9H1M4 99 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 PRO3102Q9H379 93 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 UNKLQ9H9P5 680 aaKnown RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 TRAPPC2LQ9UL33 140 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 OR2H2O95918 312 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 HOXA5P20719 270 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 ELLP55199 621 aaPredicted RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 RNPS1Q15287 305 aaKnown RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 OR2B11Q5JQS5 317 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 ZNF525Q8N782 197 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 SPRY4Q9C004 299 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 OR51M1Q9H341 326 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 RIMS4Q9H426 269 aaPredicted RBP15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 B4GALT7Q9UBV7 327 aa15.31■□□□□ 0.04
PTP4A3-202ENST00000349124 CD200P41217 278 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 MCEMP1Q8IX19 187 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 UBALD2Q8IYN6 164 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 SSX3Q99909 188 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 IL17BQ9UHF5 180 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 CDIPTO14735 213 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 CD55P08174 381 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 GLIPR1P48060 266 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 C4orf17Q53FE4 359 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 KHDC3LQ587J8 217 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 ZNF787Q6DD87 383 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 SCGB1C1Q8TD33 95 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 RBMXL1Q96E39 390 aaKnown RBP15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 RAB40CQ96S21 281 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 TOLLIPQ9H0E2 274 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 TMPRSS5Q9H3S3 457 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms