RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 DRAXINQ8NBI3 349 aaPredicted RBP15.52■□□□□ 0.08
PTN-201ENST00000348225 PDCD10Q9BUL8 212 aa15.52■□□□□ 0.08
PTN-201ENST00000348225 UBTD1Q9HAC8 227 aa15.52■□□□□ 0.08
PTN-201ENST00000348225 CCL28Q9NRJ3 127 aa15.52■□□□□ 0.08
PTN-201ENST00000348225 SLC25A10Q9UBX3 287 aaPredicted RBP15.52■□□□□ 0.08
PTN-201ENST00000348225 KIAA2026Q5HYC2 2103 aa15.52■□□□□ 0.07
PTN-201ENST00000348225 MPPED1O15442 326 aa15.51■□□□□ 0.07
PTN-201ENST00000348225 ADAM20O43506 726 aa15.51■□□□□ 0.07
PTN-201ENST00000348225 MRPS11P82912 194 aaKnown RBP15.51■□□□□ 0.07
PTN-201ENST00000348225 AKR1E2Q96JD6 320 aa15.51■□□□□ 0.07
PTN-201ENST00000348225 DCTN5Q9BTE1 182 aa15.51■□□□□ 0.07
PTN-201ENST00000348225 OR2S2Q9NQN1 319 aa15.51■□□□□ 0.07
PTN-201ENST00000348225 KAAG1Q9UBP8 84 aa15.51■□□□□ 0.07
PTN-201ENST00000348225 ABCA4P78363 2273 aa15.51■□□□□ 0.07
PTN-201ENST00000348225 A0A1W2PPR1 153 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 CCSO14618 274 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 NDUFB3O43676 98 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 NDUFB7P17568 137 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 LRRC10Q5BKY1 277 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 GSG1LQ6UXU4 331 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 TBC1D26Q86UD7 250 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 LDLRAD3Q86YD5 345 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 BVESQ8NE79 360 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 OR52L2PQ8NGH6 319 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 CALYQ9NYX4 217 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 JPT1Q9UK76 154 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 LAMP3Q9UQV4 416 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 hADV38S2A0JD32 116 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 FAM25EA8MYX2 175 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 TNFRSF13BO14836 293 aaPredicted RBP15.5■□□□□ 0.07
PTN-201ENST00000348225 OR5AC1P0C628 307 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 COL8A2P25067 703 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 SRPXP78539 464 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 SRSF4Q08170 494 aaKnown RBP15.5■□□□□ 0.07
PTN-201ENST00000348225 RFESDQ8TAC1 157 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 FAM216AQ8WUB2 273 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 TMEM246Q9BRR3 403 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 PRR13Q9NZ81 148 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 KCNS2Q9ULS6 477 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 ZFYVE26Q68DK2 2539 aa15.5■□□□□ 0.07
PTN-201ENST00000348225 C3orf85A0A1B0GTC6 90 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 C5orf51A6NDU8 294 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 F2RL2O00254 374 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 PHF1O43189 567 aaPredicted RBP15.49■□□□□ 0.07
PTN-201ENST00000348225 OR8U9P0C7N5 309 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 MEF2CQ06413 473 aaPredicted RBP15.49■□□□□ 0.07
PTN-201ENST00000348225 TMEM187Q14656 261 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 TMEM30BQ3MIR4 351 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 LIAT1Q6ZQX7 453 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 OR8U1Q8NH10 309 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 CORO2AQ92828 525 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 METTL8Q9H825 291 aaKnown RBP15.49■□□□□ 0.07
PTN-201ENST00000348225 LPAR3Q9UBY5 353 aa15.49■□□□□ 0.07
PTN-201ENST00000348225 KMT2BQ9UMN6 2715 aaPredicted RBP15.48■□□□□ 0.07
PTN-201ENST00000348225 MEX3AA1L020 520 aaKnown RBP15.48■□□□□ 0.07
PTN-201ENST00000348225 ZNF729A6NN14 1252 aaPredicted RBP15.48■□□□□ 0.07
PTN-201ENST00000348225 LYNX1G3V0Z9 82 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 RP2O75695 350 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 LYNX1P0DP58 116 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 PPP1CCP36873 323 aaKnown RBP15.48■□□□□ 0.07
PTN-201ENST00000348225 FGL1Q08830 312 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 GNMTQ14749 295 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 LGI3Q8N145 548 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 LRTM2Q8N967 370 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 EDARADDQ8WWZ3 215 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 SPOCK3Q9BQ16 436 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 GNG12Q9UBI6 72 aa15.48■□□□□ 0.07
PTN-201ENST00000348225 UBE2J1Q9Y385 318 aaPredicted RBP15.48■□□□□ 0.07
PTN-201ENST00000348225 KBTBD11-OT1A0A1B0GTJ5 212 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 C13orf42A0A1B0GVH6 325 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 PGLYRP1O75594 196 aaPredicted RBP15.47■□□□□ 0.07
PTN-201ENST00000348225 B3GALNT1O75752 331 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 IFNA21P01568 189 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 CGB3P0DN86 165 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 CGB7P0DN87 165 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 CYCSP99999 105 aaKnown RBP15.47■□□□□ 0.07
PTN-201ENST00000348225 MSMO1Q15800 293 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 SP6Q3SY56 376 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 LYPD2Q6UXB3 125 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 ZNF645Q8N7E2 425 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 ZBTB34Q8NCN2 500 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 TIMD4Q96H15 378 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 PARP12Q9H0J9 701 aaKnown RBP15.47■□□□□ 0.07
PTN-201ENST00000348225 COMMD9Q9P000 198 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 CLN8Q9UBY8 286 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 LINC00312Q9Y6C7 94 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 DSCAML1Q8TD84 2053 aa15.47■□□□□ 0.07
PTN-201ENST00000348225 IGHV3-43A0A0B4J1X8 118 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 G3V3Q6 166 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 ADAP1O75689 374 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 IGHV2-70P01814 119 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 IGHV3-43DP0DP04 118 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 DAOP14920 347 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 LTC4SQ16873 150 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 TP53RKQ96S44 253 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 GAL3ST2Q9H3Q3 398 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 TAS2R3Q9NYW6 316 aa15.46■□□□□ 0.07
PTN-201ENST00000348225 PIGBOS1A0A0B4J2F0 54 aa15.46■□□□□ 0.06
PTN-201ENST00000348225 H0Y980 276 aa15.46■□□□□ 0.06
PTN-201ENST00000348225 TNFSF12O43508 249 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms