RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CRYAAP02489 173 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 PSG2P11465 335 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 ZNF16P17020 682 aaPredicted RBP13.13□□□□□ -0.31
LMNA-201ENST00000347559 HNF1AP20823 631 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 FBLP22087 321 aaKnown RBP13.13□□□□□ -0.31
LMNA-201ENST00000347559 ARL4DP49703 201 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 TPPP2P59282 170 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 RPS16P62249 146 aaKnown RBP13.13□□□□□ -0.31
LMNA-201ENST00000347559 SERF2P84101 59 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 SHBQ15464 509 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 LRRC75BQ2VPJ9 315 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 TPTE2P1Q5T6R2 138 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 HAPLN4Q86UW8 402 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 SPTSSAQ969W0 71 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 OXGR1Q96P68 337 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 ZNF816-ZNF321PA0A0X1KG74 233 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 SYNGR2O43760 224 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 TYMSP04818 313 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 RPL15P61313 204 aaKnown RBP13.13□□□□□ -0.31
LMNA-201ENST00000347559 HBG1P69891 147 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 HBG2P69892 147 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 TMEM211Q6ICI0 200 aa13.13□□□□□ -0.31
LMNA-201ENST00000347559 CENPVQ7Z7K6 275 aaPredicted RBP13.13□□□□□ -0.31
LMNA-201ENST00000347559 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
LMNA-201ENST00000347559 CD300LBA8K4G0 201 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 TMEM250H0YL14 139 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 PATE4P0C8F1 98 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 ZDHHC23Q8IYP9 409 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 ZNF441Q8N8Z8 693 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 CPEB3Q8NE35 698 aaKnown RBP13.12□□□□□ -0.31
LMNA-201ENST00000347559 SGMS2Q8NHU3 365 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 PINX1Q96BK5 328 aaKnown RBP13.12□□□□□ -0.31
LMNA-201ENST00000347559 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 WDR61Q9GZS3 305 aaKnown RBP13.12□□□□□ -0.31
LMNA-201ENST00000347559 OR51B6Q9H340 312 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 TCRBV21S2A2A0A5A6 115 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 CLEC18AA5D8T8 446 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 PGLYRP1O75594 196 aaPredicted RBP13.12□□□□□ -0.31
LMNA-201ENST00000347559 CTSSP25774 331 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 KRTDAPP60985 99 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 RBX1P62877 108 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 PARM1Q6UWI2 310 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 CLEC18CQ8NCF0 446 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 TAF15Q92804 592 aaKnown RBP eCLIP13.12□□□□□ -0.31
LMNA-201ENST00000347559 PXMP4Q9Y6I8 212 aa13.12□□□□□ -0.31
LMNA-201ENST00000347559 LNP1A1A4G5 178 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 SERF1AO75920 110 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 C1QTNF9P0C862 333 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 RBM11P57052 281 aaKnown RBP13.11□□□□□ -0.31
LMNA-201ENST00000347559 UBE2G2P60604 165 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 KCNMB1Q16558 191 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 TEX43Q6ZNM6 134 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 ZNF837Q96EG3 531 aaPredicted RBP13.11□□□□□ -0.31
LMNA-201ENST00000347559 GABRG3Q99928 467 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 METTL7AQ9H8H3 244 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 MPLP40238 635 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 BAGE2Q86Y30 109 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 STPG4Q8N801 248 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 CCL25O15444 150 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 RANP62826 216 aaKnown RBP13.11□□□□□ -0.31
LMNA-201ENST00000347559 PLPPR5Q32ZL2 321 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 FAM69BQ5VUD6 431 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 ACSM6Q6P461 480 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 OR5D13Q8NGL4 314 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 NEIL1Q96FI4 390 aaPredicted RBP13.11□□□□□ -0.31
LMNA-201ENST00000347559 BTF3L4Q96K17 158 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
LMNA-201ENST00000347559 CBLN1P23435 193 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 F2RP25116 425 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 TXN2Q99757 166 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 REV3LO60673 3130 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 LAMA1P25391 3075 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 THADAQ6YHU6 1953 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 OR5G3P0C626 314 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 SPINK2P20155 84 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 LCN2P80188 198 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 SLC38A11Q08AI6 406 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 MRPL52Q86TS9 123 aaKnown RBP13.1□□□□□ -0.31
LMNA-201ENST00000347559 OR5AU1Q8NGC0 362 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 OR10G9Q8NGN4 311 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 OR10G7Q8NGN6 311 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 OR1L6Q8NGR2 347 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 DERL1Q9BUN8 251 aa13.1□□□□□ -0.31
LMNA-201ENST00000347559 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 H0Y980 276 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 YPEL1O60688 119 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 CEACAM8P31997 349 aaPredicted RBP13.09□□□□□ -0.31
LMNA-201ENST00000347559 OR8B8Q15620 311 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 YPEL2Q96QA6 119 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 LRRC61Q9BV99 259 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 SPTY2D1-AS1A0A0U1RR47 76 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 NPPCP23582 126 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms