RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 Q5BKY6 102 aa17.84■□□□□ 0.45
TSPAN3-202ENST00000346495 TBC1D26Q86UD7 250 aa17.84■□□□□ 0.45
TSPAN3-202ENST00000346495 DTX2Q86UW9 622 aa17.84■□□□□ 0.45
TSPAN3-202ENST00000346495 BVESQ8NE79 360 aa17.84■□□□□ 0.45
TSPAN3-202ENST00000346495 OR52L2PQ8NGH6 319 aa17.84■□□□□ 0.45
TSPAN3-202ENST00000346495 AKR1E2Q96JD6 320 aa17.84■□□□□ 0.45
TSPAN3-202ENST00000346495 C3orf85A0A1B0GTC6 90 aa17.83■□□□□ 0.45
TSPAN3-202ENST00000346495 TNFRSF13BO14836 293 aaPredicted RBP17.83■□□□□ 0.45
TSPAN3-202ENST00000346495 NDUFA2O43678 99 aa17.83■□□□□ 0.45
TSPAN3-202ENST00000346495 DANCRP0C864 163 aa17.83■□□□□ 0.45
TSPAN3-202ENST00000346495 METTL8Q9H825 291 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-202ENST00000346495 TRGV10A0A0A0MS01 117 aa17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 PHF1O43189 567 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 FGL1Q08830 312 aa17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 SP6Q3SY56 376 aa17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 LIAT1Q6ZQX7 453 aa17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 LRTM2Q8N967 370 aa17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 NEU4Q8WWR8 484 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 SEC22AQ96IW7 307 aa17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 OR2S2Q9NQN1 319 aa17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 SLC25A10Q9UBX3 287 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-202ENST00000346495 PKDREJQ9NTG1 2253 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 C13orf42A0A1B0GVH6 325 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 A6NNC1 897 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 ADAP1O75689 374 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 C1QL1O75973 258 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 GOSR1O95249 250 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 FSTL3O95633 263 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 SOD3P08294 240 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 OR8U9P0C7N5 309 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 SRPXP78539 464 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 CYCSP99999 105 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 GNMTQ14749 295 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 MEX3BQ6ZN04 569 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 LGI3Q8N145 548 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 C9orf62Q8N4C0 152 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 OR8U1Q8NH10 309 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 RFESDQ8TAC1 157 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 PARP12Q9H0J9 701 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 CALYQ9NYX4 217 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 COMMD9Q9P000 198 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 KAAG1Q9UBP8 84 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 JPT1Q9UK76 154 aa17.82■□□□□ 0.44
TSPAN3-202ENST00000346495 ADAM20O43506 726 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 PGLYRP1O75594 196 aaPredicted RBP17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 HOXB5P09067 269 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 CGB3P0DN86 165 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 CGB7P0DN87 165 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 NDUFB7P17568 137 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 COL8A2P25067 703 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 GLYATL2Q8WU03 294 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 CORO2AQ92828 525 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 TP53RKQ96S44 253 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 TMEM246Q9BRR3 403 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 NMES1Q9C002 83 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 KCNS2Q9ULS6 477 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 DSCAML1Q8TD84 2053 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 RELNP78509 3460 aa17.81■□□□□ 0.44
TSPAN3-202ENST00000346495 A0A1W2PPR1 153 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 MEX3AA1L020 520 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 F2RL2O00254 374 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 NDUFB3O43676 98 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 SNAPC5O75971 98 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 IFNA21P01568 189 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 PPP1CCP36873 323 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 LAMTOR1Q6IAA8 161 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 GRPEL2Q8TAA5 225 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 FAM216AQ8WUB2 273 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 MSI2Q96DH6 328 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 UBE2J1Q9Y385 318 aaPredicted RBP17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 B3GALNT1O75752 331 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 WNT2P09544 360 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 MRPS11P82912 194 aaKnown RBP17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 MEF2CQ06413 473 aaPredicted RBP17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 LRRC10Q5BKY1 277 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 ZBTB34Q8NCN2 500 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 C2orf50Q96LR7 162 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 TMEM222Q9H0R3 208 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 PLSCR3Q9NRY6 295 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 BOLA1Q9Y3E2 137 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 HSPB11Q9Y547 144 aa17.8■□□□□ 0.44
TSPAN3-202ENST00000346495 IGHV3-43A0A0B4J1X8 118 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 KBTBD11-OT1A0A1B0GTJ5 212 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 hADV38S2A0JD32 116 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 ZNF729A6NN14 1252 aaPredicted RBP17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 H0Y980 276 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 IGLV2-14P01704 120 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 IGHV3-43DP0DP04 118 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 MSMO1Q15800 293 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 C17orf58Q2M2W7 97 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 LYPD2Q6UXB3 125 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 ZNF645Q8N7E2 425 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 EDARADDQ8WWZ3 215 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 C18orf12Q96KH6 178 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 UBTD1Q9HAC8 227 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 GNG12Q9UBI6 72 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 CLN8Q9UBY8 286 aa17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 KLF2Q9Y5W3 355 aaPredicted RBP17.79■□□□□ 0.44
TSPAN3-202ENST00000346495 HMSDA8MTL9 139 aa17.78■□□□□ 0.44
TSPAN3-202ENST00000346495 LYNX1G3V0Z9 82 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms