RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 HOGA1Q86XE5 327 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 BPIFA4PQ86YQ2 179 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 DEFB108BQ8NET1 73 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 ZNF205O95201 554 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 CCL3P10147 92 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 HLA-GP17693 338 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 DEFB109BQ30KR1 87 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 LDLRAD2Q5SZI1 272 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 MRGPREQ86SM8 312 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 H1FXQ92522 213 aaKnown RBP13.51□□□□□ -0.25
SRPK1-201ENST00000346162 GPX7Q96SL4 187 aaPredicted RBP13.51□□□□□ -0.25
SRPK1-201ENST00000346162 PDCD6O75340 191 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 NGFRP08138 427 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 VSIG8P0DPA2 414 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 SLC2A8Q9NY64 477 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 ANXA10Q9UJ72 324 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 TCFL5Q9UL49 500 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 OR2M3Q8NG83 312 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 MRPS18BQ9Y676 258 aaKnown RBP13.51□□□□□ -0.25
SRPK1-201ENST00000346162 ANK1P16157 1881 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 GRIFINA4D1Z8 144 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 LRRC30A6NM36 301 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 MDH2P40926 338 aaKnown RBP13.5□□□□□ -0.25
SRPK1-201ENST00000346162 RNPS1Q15287 305 aaKnown RBP13.5□□□□□ -0.25
SRPK1-201ENST00000346162 ANKRD55Q3KP44 614 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 R3HDM4Q96D70 268 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 DECR2Q9NUI1 292 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 CLDN16Q9Y5I7 305 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 TSPAN2O60636 221 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 KIR3DL2P43630 455 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 SRP14P37108 136 aaKnown RBP13.5□□□□□ -0.25
SRPK1-201ENST00000346162 PMCHL1Q16048 86 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 PLPPR5Q32ZL2 321 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 MRPL54Q6P161 138 aaKnown RBP13.5□□□□□ -0.25
SRPK1-201ENST00000346162 UCN2Q96RP3 112 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 NKX6-3A6NJ46 265 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 ENSAO43768 121 aaKnown RBP13.5□□□□□ -0.25
SRPK1-201ENST00000346162 GNG4P50150 75 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 VAX1Q5SQQ9 334 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 ZNF835Q9Y2P0 537 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 NEUROG3Q9Y4Z2 214 aa13.5□□□□□ -0.25
SRPK1-201ENST00000346162 NKX2-6A6NCS4 301 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 CT45A6P0DMU7 189 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 CT45A5P0DMU8 189 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 CT45A7P0DMV0 189 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 SELLP14151 372 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 PRDX4Q13162 271 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 CT45A1Q5HYN5 189 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 FA2HQ7L5A8 372 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 ATOH7Q8N100 152 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 CT45A3Q8NHU0 189 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 ZCCHC14Q8WYQ9 949 aaKnown RBP13.49□□□□□ -0.25
SRPK1-201ENST00000346162 SF3B5Q9BWJ5 86 aaKnown RBP13.49□□□□□ -0.25
SRPK1-201ENST00000346162 CACNG5Q9UF02 275 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 PATE3B3GLJ2 98 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 GPR12P47775 334 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 SPINK14Q6IE38 97 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 FAM117AQ9C073 453 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 PRRG2O14669 202 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 MEOX1P50221 254 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 MEF2BQ02080 365 aaPredicted RBP13.49□□□□□ -0.25
SRPK1-201ENST00000346162 MGAT2Q10469 447 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 UNQ9370/PRO34162Q6UXP9 181 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 PECRQ9BY49 303 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 SPTBN2O15020 2390 aa13.49□□□□□ -0.25
SRPK1-201ENST00000346162 VDAC1P21796 283 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
SRPK1-201ENST00000346162 ZNF766Q5HY98 468 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 TMEM252Q8N6L7 170 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 UBALD1Q8TB05 177 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 ZNRF4Q8WWF5 429 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 MYOZ1Q9NP98 299 aaPredicted RBP13.48□□□□□ -0.25
SRPK1-201ENST00000346162 PATJQ8NI35 1801 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 CCL2P13500 99 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 MST1P26927 711 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 AESQ08117 197 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 LY6G6FQ5SQ64 297 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 CT55Q8WUE5 264 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 ADAT3Q96EY9 351 aaPredicted RBP13.48□□□□□ -0.25
SRPK1-201ENST00000346162 AMELYQ99218 206 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 CDX2Q99626 313 aaPredicted RBP13.48□□□□□ -0.25
SRPK1-201ENST00000346162 EGLN1Q9GZT9 426 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 LAMTOR2Q9Y2Q5 125 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 A0A087WWC5 75 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 TRAV17A0A0B4J275 112 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 TRBV5-5A0A0J9YX44 114 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 COX5BP10606 129 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 OR4X1Q8NH49 305 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 WDR90Q96KV7 1748 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 EFEMP2O95967 443 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 HAND1O96004 215 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 UQCRFS1P47985 274 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 BIVMQ86UB2 503 aa13.48□□□□□ -0.25
SRPK1-201ENST00000346162 KLF2Q9Y5W3 355 aaPredicted RBP13.48□□□□□ -0.25
SRPK1-201ENST00000346162 A0A1B0GWJ7 208 aa13.47□□□□□ -0.25
SRPK1-201ENST00000346162 CA6P23280 308 aa13.47□□□□□ -0.25
SRPK1-201ENST00000346162 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms