RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 RNF122Q9H9V4 155 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 MSGN1A6NI15 193 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 GABRG2P18507 467 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 ZNF506Q5JVG8 444 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 CPEB3Q8NE35 698 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 IFI44Q8TCB0 444 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 KMT2EQ8IZD2 1858 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 DENND4AQ7Z401 1863 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 IGKV1D-42A0A075B6H8 117 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TCF21O43680 179 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 C12orf54Q6X4T0 127 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 GNRHR2Q96P88 292 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM191AQ9H0A3 160 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 IL19Q9UHD0 177 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 ZDHHC8Q9ULC8 765 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 SERTM2A0A1B0GWG4 89 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 CA6P23280 308 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 KIR2DL1P43626 348 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 RPS23P62266 143 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 HIST3H3Q16695 136 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 RNASEKQ6P5S7 137 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 OR1L3Q8NH93 324 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 Q96M66 194 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 RBM14Q96PK6 669 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 PCGF1Q9BSM1 259 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 PSMG3Q9BT73 122 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM250H0YL14 139 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 HLA-DQA1P01909 254 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 APCSP02743 223 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 PDCD1Q15116 288 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 CFPP27918 469 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 OPRK1P41145 380 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 SLC25A28Q96A46 364 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 RASL10BQ96S79 203 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 PLSCR2Q9NRY7 297 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TECRQ9NZ01 308 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM240Q5SV17 173 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 ACSM6Q6P461 480 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 D2HGDHQ8N465 521 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 BEND2Q8NDZ0 799 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 DYRK2Q92630 601 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 NDFIP1Q9BT67 221 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 MSL2Q9HCI7 577 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 WIPI2Q9Y4P8 454 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 NKX6-3A6NJ46 265 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 CLDND2Q8NHS1 167 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 ADIPOR1Q96A54 375 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 ZPBPQ9BS86 351 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 DECR2Q9NUI1 292 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TRAV34A0A0B4J273 112 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 PMS2P1A4D2B8 440 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 PPP1CAP62136 330 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 C21orf62-AS1Q17RA5 79 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 R3HDM4Q96D70 268 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 GFI1Q99684 422 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 QTRT1Q9BXR0 403 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 SDF2L1Q9HCN8 221 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 FANCMQ8IYD8 2048 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TRGV10A0A0A0MS01 117 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 SRP19P09132 144 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 OR4P4Q8NGL7 312 aa4.16□□□□□ -1.74
CSMD3-203ENST00000343508 MRPL18Q9H0U6 180 aaKnown RBP4.16□□□□□ -1.74
CSMD3-203ENST00000343508 TRAV9-1A0A075B6T8 112 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 A0A1W2PP11 408 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 SPINK4O60575 86 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 SRSF5Q13243 272 aaKnown RBP4.15□□□□□ -1.74
CSMD3-203ENST00000343508 LYRM7Q5U5X0 104 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 FAM173AQ9BQD7 235 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 ATG101Q9BSB4 218 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM131Q92545 1883 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 MEX3AA1L020 520 aaKnown RBP4.15□□□□□ -1.74
CSMD3-203ENST00000343508 CEACAM21Q3KPI0 293 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 FA2HQ7L5A8 372 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 OR10X1Q8NGY0 326 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 TP53RKQ96S44 253 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 DUSP13Q9UII6 198 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 LHFPL6Q9Y693 200 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 ENSAO43768 121 aaKnown RBP4.15□□□□□ -1.74
CSMD3-203ENST00000343508 IL11P20809 199 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 MST1P26927 711 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 A0A1B0GW64 132 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 C5orf67F2Z3F1 127 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 PIAS2O75928 621 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 KBTBD11O94819 623 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 CXorf66Q5JRM2 361 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-203ENST00000343508 WDR25Q64LD2 544 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-203ENST00000343508 SLC25A47Q6Q0C1 308 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 BCL2L2Q92843 193 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-203ENST00000343508 HSPB9Q9BQS6 159 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 NDUFAF3Q9BU61 184 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 CBLN4Q9NTU7 201 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM38BQ9NVV0 291 aa4.15□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM210A6NLX4 147 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV2-70P01814 119 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 NHLH1Q02575 133 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 JOSD1Q15040 202 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 PSG5Q15238 335 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF718Q3SXZ3 478 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 C10orf91Q5T1B1 145 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms