RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ABHD14BQ96IU4 210 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 PCED1AQ9H1Q7 454 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 VSIRQ9H7M9 311 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 GLRX2Q9NS18 164 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 KCNIP1Q9NZI2 227 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 CLN8Q9UBY8 286 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 FOXD3Q9UJU5 478 aaPredicted RBP10.74□□□□□ -0.69
LMX1A-202ENST00000342310 PLXNB1O43157 2135 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 A0A1W2PPQ1 181 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 CLEC18AA5D8T8 446 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 TIMM8AO60220 97 aaPredicted RBP10.74□□□□□ -0.69
LMX1A-202ENST00000342310 FKBP2P26885 142 aaKnown RBP10.74□□□□□ -0.69
LMX1A-202ENST00000342310 PRAMEF6Q5VXH4 476 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 BTNL8Q6UX41 500 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 C15orf54Q8N8G6 183 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 ZNF709Q8N972 641 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 CLEC18CQ8NCF0 446 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 KCNE4Q8WWG9 221 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 MOB3AQ96BX8 217 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 MSI2Q96DH6 328 aaKnown RBP10.74□□□□□ -0.69
LMX1A-202ENST00000342310 SSX3Q99909 188 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 DCTN5Q9BTE1 182 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 GGACTQ9BVM4 153 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 TTTY12Q9BZ98 90 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 TMEM222Q9H0R3 208 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 DOK5Q9P104 306 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 CHD8Q9HCK8 2581 aa10.74□□□□□ -0.69
LMX1A-202ENST00000342310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.69
LMX1A-202ENST00000342310 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 LRRC3CA6NJW4 275 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 TRDCB7Z8K6 153 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 CD55P08174 381 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 RNF212Q495C1 297 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 M1APQ8TC57 530 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 TMEM131Q92545 1883 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 SERPINA7P05543 415 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 HEXAP06865 529 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 DANCRP0C864 163 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 HIST3H3Q16695 136 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 SLC25A53Q5H9E4 307 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 TM2D1Q9BX74 207 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 OR2D2Q9H210 308 aa10.73□□□□□ -0.69
LMX1A-202ENST00000342310 ANKRD11Q6UB99 2663 aaPredicted RBP10.73□□□□□ -0.69
LMX1A-202ENST00000342310 TMEM50AO95807 157 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 CCL1P22362 96 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 CRYGSP22914 178 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 ECI1P42126 302 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 TLE4Q04727 773 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 CCDC54Q8NEL0 328 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 LEAP2Q969E1 77 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 GPR146Q96CH1 333 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 BOD1Q96IK1 185 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 WDR54Q9H977 334 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 CARHSP1Q9Y2V2 147 aaKnown RBP10.72□□□□□ -0.69
LMX1A-202ENST00000342310 RPL36A-HNRNPH2H7BZ11 118 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 CRYAAP02489 173 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 VDAC1P21796 283 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 SRSF6Q13247 344 aaKnown RBP10.72□□□□□ -0.69
LMX1A-202ENST00000342310 OR8G1Q15617 311 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 SELENOHQ8IZQ5 122 aaKnown RBP10.72□□□□□ -0.69
LMX1A-202ENST00000342310 VKORC1L1Q8N0U8 176 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 OR4F5Q8NH21 305 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 OR4F4Q96R69 305 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 ZDHHC8Q9ULC8 765 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 POMT1Q9Y6A1 747 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 PGLYRP1O75594 196 aaPredicted RBP10.72□□□□□ -0.69
LMX1A-202ENST00000342310 IFNA10P01566 189 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 DTYMKP23919 212 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 GNG3P63215 75 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 S100A12P80511 92 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 DCAF10Q5QP82 559 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 SPNS3Q6ZMD2 512 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 OR52L2PQ8NGH6 319 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 TCEAL7Q9BRU2 100 aa10.72□□□□□ -0.69
LMX1A-202ENST00000342310 YLPM1P49750 1951 aaKnown RBP10.72□□□□□ -0.69
LMX1A-202ENST00000342310 TRBV6-7A0A0A0MS04 114 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 ZNF705FA8MVS1 300 aaPredicted RBP10.71□□□□□ -0.69
LMX1A-202ENST00000342310 ZNF705DP0CH99 300 aaPredicted RBP10.71□□□□□ -0.69
LMX1A-202ENST00000342310 ZNF705BP0CI00 300 aaPredicted RBP10.71□□□□□ -0.69
LMX1A-202ENST00000342310 SMIM6P0DI80 62 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 GAMTQ14353 236 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 IL13RA2Q14627 380 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 SPOCK3Q9BQ16 436 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 SMIM7Q9BQ49 75 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 FAM173AQ9BQD7 235 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 PSG11Q9UQ72 335 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 OR5H1A6NKK0 313 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 SPINK4O60575 86 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 MRPL41Q8IXM3 137 aaKnown RBP10.71□□□□□ -0.69
LMX1A-202ENST00000342310 ZNF610Q8N9Z0 462 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 CABLES2Q9BTV7 478 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 RPRMQ9NS64 109 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 LAMP3Q9UQV4 416 aa10.71□□□□□ -0.69
LMX1A-202ENST00000342310 OR8U8P0C7N1 319 aa10.71□□□□□ -0.7
LMX1A-202ENST00000342310 SEC11BP0C7V7 166 aa10.71□□□□□ -0.7
LMX1A-202ENST00000342310 CRIP3Q6Q6R5 217 aa10.71□□□□□ -0.7
LMX1A-202ENST00000342310 ZNF573Q86YE8 665 aa10.71□□□□□ -0.7
LMX1A-202ENST00000342310 OR1L1Q8NH94 360 aa10.71□□□□□ -0.7
LMX1A-202ENST00000342310 SF3B5Q9BWJ5 86 aaKnown RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms