RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 KLF9Q13886 244 aaPredicted RBP13.25□□□□□ -0.29
COL11A2-201ENST00000341947 CEACAM21Q3KPI0 293 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 FADS6Q8N9I5 356 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 LRRC75AQ8NAA5 344 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 TTC3P53804 2025 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 TM4SF20Q53R12 229 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 OR4A5Q8NH83 315 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 METTL1Q9UBP6 276 aaKnown RBP13.25□□□□□ -0.29
COL11A2-201ENST00000341947 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 GCSHP23434 173 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 MC5RP33032 325 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 TMEM78Q5T7P6 136 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 TMEM251Q8N6I4 163 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 DTX4Q9Y2E6 619 aa13.25□□□□□ -0.29
COL11A2-201ENST00000341947 A0A0J9YW62 118 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 HIST1H1BP16401 226 aaKnown RBP13.24□□□□□ -0.29
COL11A2-201ENST00000341947 MMP16P51512 607 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 TWIST1Q15672 202 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 HOGA1Q86XE5 327 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 DPPA3Q6W0C5 159 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 NUP37Q8NFH4 326 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
COL11A2-201ENST00000341947 CISD1Q9NZ45 108 aaKnown RBP13.24□□□□□ -0.29
COL11A2-201ENST00000341947 FAM27BQ5VT28 67 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 SOSTQ9BQB4 213 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 ZNF137PP52743 207 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 CROCCQ5TZA2 2017 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 TRAV8-7A0A075B6U6 113 aa13.24□□□□□ -0.29
COL11A2-201ENST00000341947 EAF1Q96JC9 268 aaPredicted RBP13.24□□□□□ -0.29
COL11A2-201ENST00000341947 PSG4Q00888 419 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 RELBQ01201 579 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 TMEM52Q8NDY8 209 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 WNT9BO14905 357 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 NKX2-8O15522 239 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 ZNF738Q8NE65 137 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 OR1N2Q8NGR9 330 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 PITX3O75364 302 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 IER3P46695 156 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 HDHD3Q9BSH5 251 aaPredicted RBP13.23□□□□□ -0.29
COL11A2-201ENST00000341947 SCNM1Q9BWG6 230 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 CEACAM18A8MTB9 384 aa13.23□□□□□ -0.29
COL11A2-201ENST00000341947 H3BVH4 76 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 AP4M1O00189 453 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 NGFRP08138 427 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 CTSSP25774 331 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 HSD17B13Q7Z5P4 300 aaPredicted RBP13.22□□□□□ -0.29
COL11A2-201ENST00000341947 OR5AU1Q8NGC0 362 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 LGALSLQ3ZCW2 172 aaPredicted RBP13.22□□□□□ -0.29
COL11A2-201ENST00000341947 ITLN1Q8WWA0 313 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 CDK5RAP2Q96SN8 1893 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 HBZP02008 142 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 FCGR3AP08637 254 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 MAS1LP35410 378 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.22□□□□□ -0.29
COL11A2-201ENST00000341947 STPG3Q8N7X2 389 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 PLAC1Q9HBJ0 212 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 A0A0U1RQV5 110 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 A6NDN8 102 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 GFRA1P56159 465 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 ATG101Q9BSB4 218 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 SIRT7Q9NRC8 400 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 LAMTOR1Q6IAA8 161 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 V9GYH0 126 aa13.22□□□□□ -0.29
COL11A2-201ENST00000341947 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 DDB2Q92466 427 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 PTX4Q96A99 478 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 FUT9Q9Y231 359 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 OR4C46A6NHA9 309 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 FAM74A7A6NL05 159 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 CELA2AP08217 269 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 C11orf91Q3C1V1 193 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 ZNF880Q6PDB4 577 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 TPRX1Q8N7U7 411 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 ADIPOR1Q96A54 375 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 IFT22Q9H7X7 185 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 IGHV3-72A0A0B4J1Y9 119 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 NUBP1P53384 320 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 MRPL30Q8TCC3 161 aaKnown RBP13.21□□□□□ -0.29
COL11A2-201ENST00000341947 NPVFQ9HCQ7 196 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 IL19Q9UHD0 177 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 KIAA1551Q9HCM1 1747 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 IGKV1D-16P01601 117 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 FGF12P61328 243 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 WNT2BQ93097 391 aa13.21□□□□□ -0.29
COL11A2-201ENST00000341947 LEUTXA8MZ59 168 aa13.21□□□□□ -0.3
COL11A2-201ENST00000341947 ZNF324O75467 553 aaPredicted RBP13.21□□□□□ -0.3
COL11A2-201ENST00000341947 WDFY1Q8IWB7 410 aa13.21□□□□□ -0.3
COL11A2-201ENST00000341947 ZNF645Q8N7E2 425 aa13.21□□□□□ -0.3
COL11A2-201ENST00000341947 RAB24Q969Q5 203 aa13.21□□□□□ -0.3
COL11A2-201ENST00000341947 GUCD1Q96NT3 240 aa13.21□□□□□ -0.3
COL11A2-201ENST00000341947 NEURL2Q9BR09 285 aa13.21□□□□□ -0.3
COL11A2-201ENST00000341947 FAM181BA6NEQ2 426 aa13.2□□□□□ -0.3
COL11A2-201ENST00000341947 RAX2Q96IS3 184 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms