RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 IFNL4K9M1U5 179 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 ZNF16P17020 682 aaPredicted RBP19.06■□□□□ 0.64
TRIM28-202ENST00000341753 MDH2P40926 338 aaKnown RBP19.06■□□□□ 0.64
TRIM28-202ENST00000341753 PRSS8Q16651 343 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 NCR3LG1Q68D85 454 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 PRR18Q8N4B5 295 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 VAX2Q9UIW0 290 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 TMEM265A0A087WTH1 108 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 CARD18P57730 90 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 PRDX4Q13162 271 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 TESK1Q15569 626 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 IMMP1LQ96LU5 166 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 WFIKKN1Q96NZ8 548 aa19.06■□□□□ 0.64
TRIM28-202ENST00000341753 AHCTF1Q8WYP5 2266 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 A8MWP6 167 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 ZNF737O75373 536 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 FGF7P21781 194 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 KRTAP27-1Q3LI81 207 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 DNLZQ5SXM8 178 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 ZNF66Q6ZN08 573 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 CPT1CQ8TCG5 803 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 HIPK2Q9H2X6 1198 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 SYNGR1O43759 233 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 CYTIPO60759 359 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 IGKV1-39P01597 117 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 IGKV1D-39P04432 117 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 ZNF124Q15973 351 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 IGFBP7Q16270 282 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 TRIM61Q5EBN2 209 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 SPANXN5Q5MJ07 72 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 PCSK4Q6UW60 755 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 MBD3L1Q8WWY6 194 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 PLA2G3Q9NZ20 509 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 ATP23Q9Y6H3 246 aa19.05■□□□□ 0.64
TRIM28-202ENST00000341753 CD81P60033 236 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 AGBL5Q8NDL9 886 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 GATAD1Q8WUU5 269 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 TMEM37Q8WXS4 190 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 PCGF1Q9BSM1 259 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 SRD5A3Q9H8P0 318 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 OR1A1Q9P1Q5 309 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 PPP1R3CQ9UQK1 317 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 DIDO1Q9BTC0 2240 aaKnown RBP19.04■□□□□ 0.64
TRIM28-202ENST00000341753 UBE2L5PA0A1B0GUS4 154 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 ZNF716A6NP11 495 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 SYNGR2O43760 224 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 TCEAL6Q6IPX3 200 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 LHX4Q969G2 390 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 LURAP1Q96LR2 239 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 RAB40CQ96S21 281 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 PRSS50Q9UI38 385 aa19.04■□□□□ 0.64
TRIM28-202ENST00000341753 A0A096LPE4 126 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 KIR2DS1A0A191URI9 304 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 A0A1W2PPQ1 181 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 A0A1W2PPZ6 126 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 ARGFXA6NJG6 315 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 LRRC3CA6NJW4 275 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 IGKV1D-33P01593 117 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 IGKV1-33P01594 117 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 PFN1P07737 140 aaKnown RBP19.03■□□□□ 0.64
TRIM28-202ENST00000341753 KIR2DS4P43632 304 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 RAC3P60763 192 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 FGF12P61328 243 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 IL11RAQ14626 422 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 KIR2DS1Q14954 304 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 OR5T1Q8NG75 326 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 ABHD3Q8WU67 409 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 OR4C12Q96R67 309 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 LOC102723996A0A087X1L8 192 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 DVL1O14640 695 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 TGOLN2O43493 480 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 IL18BPO95998 194 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 SSR4P51571 173 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 CLDN15P56746 228 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 OR8G2PQ6IF36 304 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 MRGPRGQ86SM5 289 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 ATG101Q9BSB4 218 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 WASF3Q9UPY6 502 aa19.03■□□□□ 0.64
TRIM28-202ENST00000341753 FRYQ5TBA9 3013 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 MKRN2OSH3BPM6 223 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 GALR2O43603 387 aaPredicted RBP19.02■□□□□ 0.64
TRIM28-202ENST00000341753 GALR1P47211 349 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 DBX2Q6ZNG2 339 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 Q6ZS49 121 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 GUCD1Q96NT3 240 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 GPR35Q9HC97 309 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 CD300LBA8K4G0 201 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 EREGO14944 169 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 MRPL30Q8TCC3 161 aaKnown RBP19.02■□□□□ 0.64
TRIM28-202ENST00000341753 C2orf88Q9BSF0 95 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 SLC25A22Q9H936 323 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 WDR54Q9H977 334 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 NAT8Q9UHE5 227 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 ZNF391Q9UJN7 358 aa19.02■□□□□ 0.64
TRIM28-202ENST00000341753 PAX1P15863 534 aa19.02■□□□□ 0.63
TRIM28-202ENST00000341753 IDH3GP51553 393 aaPredicted RBP19.02■□□□□ 0.63
TRIM28-202ENST00000341753 TMEM241Q24JQ0 296 aa19.02■□□□□ 0.63
TRIM28-202ENST00000341753 RPS19BP1Q86WX3 136 aaKnown RBP19.02■□□□□ 0.63
TRIM28-202ENST00000341753 OR10J5Q8NHC4 309 aa19.02■□□□□ 0.63
TRIM28-202ENST00000341753 IL22RA2Q969J5 263 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms