RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 H1FOOQ8IZA3 346 aaPredicted RBP14.41□□□□□ -0.1
CLDN4-201ENST00000340958 H1FXQ92522 213 aaKnown RBP14.41□□□□□ -0.1
CLDN4-201ENST00000340958 SLC5A7Q9GZV3 580 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 RAB9BQ9NP90 201 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 OR2S2Q9NQN1 319 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 RDH8Q9NYR8 311 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 OR2W1Q9Y3N9 320 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 POLQO75417 2590 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 C9orf170A2RU37 121 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 UCP3P55916 312 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 PIGPP57054 158 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 SLC9A3R2Q15599 337 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 LYPD2Q6UXB3 125 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 SGPP2Q8IWX5 399 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 C12orf45Q8N5I9 185 aaPredicted RBP14.41□□□□□ -0.1
CLDN4-201ENST00000340958 DMRTB1Q96MA1 342 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 PHB2Q99623 299 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 MGAT4CQ9UBM8 478 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 RAI1Q7Z5J4 1906 aaPredicted RBP14.4□□□□□ -0.1
CLDN4-201ENST00000340958 hADV38S2A0JD32 116 aa14.4□□□□□ -0.1
CLDN4-201ENST00000340958 HSD17B6O14756 317 aa14.4□□□□□ -0.1
CLDN4-201ENST00000340958 S100GP29377 79 aa14.4□□□□□ -0.1
CLDN4-201ENST00000340958 SSTR2P30874 369 aa14.4□□□□□ -0.1
CLDN4-201ENST00000340958 LUMP51884 338 aaPredicted RBP14.4□□□□□ -0.1
CLDN4-201ENST00000340958 CCDC71LQ8N9Z2 235 aa14.4□□□□□ -0.1
CLDN4-201ENST00000340958 OR52L2PQ8NGH6 319 aa14.4□□□□□ -0.1
CLDN4-201ENST00000340958 RANGRFQ9HD47 186 aaPredicted RBP14.4□□□□□ -0.1
CLDN4-201ENST00000340958 OPN4Q9UHM6 478 aa14.4□□□□□ -0.1
CLDN4-201ENST00000340958 NPIPB11E5RHQ5 1161 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 RP2O75695 350 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 TUSC2O75896 110 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 F12P00748 615 aaPredicted RBP14.39□□□□□ -0.11
CLDN4-201ENST00000340958 KCTD9Q7L273 389 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 NOXA1Q86UR1 476 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 OR10V1Q8NGI7 309 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 CCL19Q99731 98 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 NCOR1P1Q9H4R4 102 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 CHODLQ9H9P2 273 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 GNG12Q9UBI6 72 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 KCNS2Q9ULS6 477 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 KCNIP3Q9Y2W7 256 aa14.39□□□□□ -0.11
CLDN4-201ENST00000340958 IGHV3-43A0A0B4J1X8 118 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 DVL1O14640 695 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 SFT2D2O95562 160 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 IGHV3-43DP0DP04 118 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 EFNA4P52798 201 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 KRTAP10-9P60411 292 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 RPL31P62899 125 aaKnown RBP14.38□□□□□ -0.11
CLDN4-201ENST00000340958 CMTM1Q8IZ96 169 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 FGFRL1Q8N441 504 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 OR11H7Q8NGC8 314 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
CLDN4-201ENST00000340958 TMEM230Q96A57 120 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 RSRP1Q9BUV0 290 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 SLC2A9Q9NRM0 540 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 CALYQ9NYX4 217 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 KAAG1Q9UBP8 84 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 PDZD2O15018 2839 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 DSCAMO60469 2012 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 TANC2Q9HCD6 1990 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 IGKV1D-13A0A0B4J2D9 117 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 GPR31O00270 319 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 GOSR2O14653 212 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 SLC22A5O76082 557 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 IFNA2P01563 188 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 IGHV2-70P01814 119 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 HEXAP06865 529 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 SULT1A3P0DMM9 295 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 SULT1A4P0DMN0 295 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 IGKV1-13P0DP09 117 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 ANXA3P12429 323 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 RPS2P15880 293 aaKnown RBP14.38□□□□□ -0.11
CLDN4-201ENST00000340958 CXCL3P19876 107 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 LIN54Q6MZP7 749 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 NLRC3Q7RTR2 1065 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 OR2AK2Q8NG84 335 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 COQ8AQ8NI60 647 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 FYTTD1Q96QD9 318 aaKnown RBP14.38□□□□□ -0.11
CLDN4-201ENST00000340958 CHIAQ9BZP6 476 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 SLA2Q9H6Q3 261 aa14.38□□□□□ -0.11
CLDN4-201ENST00000340958 TNFRSF13BO14836 293 aaPredicted RBP14.37□□□□□ -0.11
CLDN4-201ENST00000340958 DUS4LO95620 317 aaKnown RBP14.37□□□□□ -0.11
CLDN4-201ENST00000340958 OR8U9P0C7N5 309 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 OMGP23515 440 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 GNRHRP30968 328 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 PPP1CCP36873 323 aaKnown RBP14.37□□□□□ -0.11
CLDN4-201ENST00000340958 TMEM33P57088 247 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 HTD2P86397 168 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 DHODHQ02127 395 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 TCTE3Q8IZS6 198 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 FAM185AQ8N0U4 392 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 OR8U1Q8NH10 309 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 PLEKHF2Q9H8W4 249 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 CCL28Q9NRJ3 127 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 CTSZQ9UBR2 303 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 AKAP6Q13023 2319 aa14.37□□□□□ -0.11
CLDN4-201ENST00000340958 ANKRD17O75179 2603 aaKnown RBP14.36□□□□□ -0.11
CLDN4-201ENST00000340958 ANKRD34BA5PLL1 514 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 C15orf65H3BRN8 121 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 GNMTQ14749 295 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms