RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ARRDC1-AS1Q9H2J1 176 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 AURKAIP1Q9NWT8 199 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-201ENST00000340437 USF3Q68DE3 2245 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 CXorf65A6NEN9 183 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 SYNGR4O95473 234 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 KRASP01116 189 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 GRPP07492 148 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 SOD3P08294 240 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 MMP7P09237 267 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-201ENST00000340437 TRGC1P0CF51 173 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 PAX9P55771 341 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 UCP2P55851 309 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 ARL16Q0P5N6 197 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 RBMXL1Q96E39 390 aaKnown RBP12.28□□□□□ -0.44
CPSF7-201ENST00000340437 TCFL5Q9UL49 500 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 CHD3Q12873 2000 aaKnown RBP12.28□□□□□ -0.44
CPSF7-201ENST00000340437 IFITM10A6NMD0 228 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 SOX15O60248 233 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 HOXA5P20719 270 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 NMSQ5H8A3 153 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 FRZBQ92765 325 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 CABLES2Q9BTV7 478 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 ATP23Q9Y6H3 246 aa12.27□□□□□ -0.44
CPSF7-201ENST00000340437 PCNX2A6NKB5 2137 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 PAX6P26367 422 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 DEFA6Q01524 100 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF816Q0VGE8 651 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-201ENST00000340437 PPP1R32Q7Z5V6 425 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 BOD1L1Q8NFC6 3051 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
CPSF7-201ENST00000340437 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-201ENST00000340437 UCP1P25874 307 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 CDX1P47902 265 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-201ENST00000340437 SSX7Q7RTT5 188 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 FAM58AQ8N1B3 248 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 C1QTNF5Q9BXJ0 243 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 SLC25A22Q9H936 323 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 MED13Q9UHV7 2174 aa12.27□□□□□ -0.45
CPSF7-201ENST00000340437 HBE1P02100 147 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 CD55P08174 381 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 CEACAM21Q3KPI0 293 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 PLPPR1Q8TBJ4 325 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 SLC39A9Q9NUM3 307 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 OR2W1Q9Y3N9 320 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 SYNGR2O43760 224 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 ERVS71-1P61550 626 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 COL19A1Q14993 1142 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 LHX4Q969G2 390 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
CPSF7-201ENST00000340437 MED12LQ86YW9 2145 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 DFFBO76075 338 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 CEACAM6P40199 344 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 IL24Q13007 206 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 CLN3Q13286 438 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 OR10V1Q8NGI7 309 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 MRPL30Q8TCC3 161 aaKnown RBP12.26□□□□□ -0.45
CPSF7-201ENST00000340437 APH1AQ96BI3 265 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 IL36GQ9NZH8 169 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 TINAGQ9UJW2 476 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 NCKAP5O14513 1909 aa12.26□□□□□ -0.45
CPSF7-201ENST00000340437 DSPP15924 2871 aaKnown RBP12.25□□□□□ -0.45
CPSF7-201ENST00000340437 NAPSAO96009 420 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 APLNRP35414 380 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 DHRS13Q6UX07 377 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 TMEM105Q8N8V8 129 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 APOBEC3DQ96AK3 386 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-201ENST00000340437 ADGRG7Q96K78 797 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 DLL3Q9NYJ7 618 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 PILRBQ9UKJ0 227 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 TRAV24A0A0B4J272 114 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 IGHV2-70P01814 119 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 GLIPR1P48060 266 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 GAMTQ14353 236 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 KHDC3LQ587J8 217 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF506Q5JVG8 444 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 DCAF12Q5T6F0 453 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 TIPARPQ7Z3E1 657 aaKnown RBP12.25□□□□□ -0.45
CPSF7-201ENST00000340437 C1orf87Q8N0U7 546 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 CT55Q8WUE5 264 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 DEFB127Q9H1M4 99 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 PRSS50Q9UI38 385 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF391Q9UJN7 358 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 ASPMQ8IZT6 3477 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 KIAA1324LA8MWY0 1029 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-201ENST00000340437 IGHV3-13P01766 116 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 IGHV3-7P01780 117 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 HSPB1P04792 205 aaKnown RBP12.25□□□□□ -0.45
CPSF7-201ENST00000340437 RTP5Q14D33 572 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 ABHD17BQ5VST6 288 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 BTNL3Q6UXE8 466 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 Q6ZSR3 168 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 LINC00469Q8N7U9 141 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 OR4C12Q96R67 309 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 RBKSQ9H477 322 aa12.25□□□□□ -0.45
CPSF7-201ENST00000340437 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF705GA8MUZ8 300 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-201ENST00000340437 LINC00205P59089 165 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms