RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 UBE2E1P51965 193 aa18.08■□□□□ 0.49
SDC3-202ENST00000339394 ABHD12Q8N2K0 398 aa18.08■□□□□ 0.49
SDC3-202ENST00000339394 PNKDQ8N490 385 aa18.08■□□□□ 0.49
SDC3-202ENST00000339394 SMIM4Q8WVI0 70 aa18.08■□□□□ 0.49
SDC3-202ENST00000339394 LEAP2Q969E1 77 aa18.08■□□□□ 0.49
SDC3-202ENST00000339394 GNG12Q9UBI6 72 aa18.08■□□□□ 0.49
SDC3-202ENST00000339394 SONP18583 2426 aaKnown RBP18.08■□□□□ 0.48
SDC3-202ENST00000339394 FSHBP01225 129 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 PTBP1P26599 531 aaKnown RBP eCLIP18.08■□□□□ 0.48
SDC3-202ENST00000339394 TMEM30BQ3MIR4 351 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 GPR157Q5UAW9 335 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 STEAP3Q658P3 488 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 OR11H6Q8NGC7 330 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 OR10V1Q8NGI7 309 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 MTFP1Q9UDX5 166 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 SLC23A1Q9UHI7 598 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 JPT1Q9UK76 154 aa18.08■□□□□ 0.48
SDC3-202ENST00000339394 RBBP9O75884 186 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 NAT1P18440 290 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 CD34P28906 385 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 GNMTQ14749 295 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 PYDC2Q56P42 97 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 TEX29Q8N6K0 151 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 CABLES2Q9BTV7 478 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 CLEC7AQ9BXN2 247 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 OR1A1Q9P1Q5 309 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 PSG11Q9UQ72 335 aa18.07■□□□□ 0.48
SDC3-202ENST00000339394 INAFM1C9JVW0 142 aa18.06■□□□□ 0.48
SDC3-202ENST00000339394 BET1O15155 118 aa18.06■□□□□ 0.48
SDC3-202ENST00000339394 HNF1AP20823 631 aa18.06■□□□□ 0.48
SDC3-202ENST00000339394 ZBTB25P24278 435 aa18.06■□□□□ 0.48
SDC3-202ENST00000339394 PPP1CCP36873 323 aaKnown RBP18.06■□□□□ 0.48
SDC3-202ENST00000339394 MORN2Q502X0 79 aa18.06■□□□□ 0.48
SDC3-202ENST00000339394 LYSMD2Q8IV50 215 aa18.06■□□□□ 0.48
SDC3-202ENST00000339394 TRBV6-7A0A0A0MS04 114 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 IGHV1-69DA0A0B4J2H0 117 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 A0A1W2PRD5 423 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 A0A1W2PRF3 423 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 A0A1W2PRM7 423 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 HSPA12AO43301 675 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 GSTZ1O43708 216 aaPredicted RBP18.05■□□□□ 0.48
SDC3-202ENST00000339394 YPEL1O60688 119 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 DIRAS3O95661 229 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 IGHV1-69P01742 117 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 CEACAM6P40199 344 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 ARPC4P59998 168 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 CHRFAM7AQ494W8 412 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 BRD3OSQ6XYD6 125 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 Q8N402 240 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 YPEL2Q96QA6 119 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 AKIP1Q9NQ31 210 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 NUP50Q9UKX7 468 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 MTORP42345 2549 aa18.05■□□□□ 0.48
SDC3-202ENST00000339394 CTXN2P0C2S0 81 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 HLA-DMAP28067 261 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 RCVRNP35243 200 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 ACTBP60709 375 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 ACTG1P63261 375 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 ZNF45Q02386 682 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 RUSC1-AS1Q66K80 236 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 ZNF626Q68DY1 528 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 MFSD4AQ8N468 514 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 PIP4P2Q8N4L2 257 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 OR5AP2Q8NGF4 316 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 OR9G1Q8NH87 305 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 OR10J5Q8NHC4 309 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 BEX2Q9BXY8 128 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 SRRQ9GZT4 340 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 CDC42EP3Q9UKI2 254 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 RBMX2Q9Y388 322 aaKnown RBP18.04■□□□□ 0.48
SDC3-202ENST00000339394 A0A1W2PPE3 182 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 ODF3BA8MYP8 253 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 J3QR06 171 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 TOR1AO14656 332 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 IGLV1-47P01700 117 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 ARG1P05089 322 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 SRP14P37108 136 aaKnown RBP18.04■□□□□ 0.48
SDC3-202ENST00000339394 GNG10P50151 68 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 ZNF134P52741 427 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 Q3ZCU0 254 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 THAP7Q9BT49 309 aaPredicted RBP18.04■□□□□ 0.48
SDC3-202ENST00000339394 ZNRD1Q9P1U0 126 aa18.04■□□□□ 0.48
SDC3-202ENST00000339394 LANCL1O43813 399 aa18.03■□□□□ 0.48
SDC3-202ENST00000339394 RGS11O94810 467 aa18.03■□□□□ 0.48
SDC3-202ENST00000339394 SSBP1Q04837 148 aaKnown RBP18.03■□□□□ 0.48
SDC3-202ENST00000339394 BEND2Q8NDZ0 799 aa18.03■□□□□ 0.48
SDC3-202ENST00000339394 ZNF596Q8TC21 504 aa18.03■□□□□ 0.48
SDC3-202ENST00000339394 GINS4Q9BRT9 223 aa18.03■□□□□ 0.48
SDC3-202ENST00000339394 PARP12Q9H0J9 701 aaKnown RBP18.03■□□□□ 0.48
SDC3-202ENST00000339394 NPFFO15130 113 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 SLC31A2O15432 143 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 RFX2P48378 723 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 PRRX1P54821 245 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 BPIFB3P59826 476 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 CT45A1Q5HYN5 189 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 ZNF439Q8NDP4 499 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 OR4P4Q8NGL7 312 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 CT45A3Q8NHU0 189 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 MMP28Q9H239 520 aa18.02■□□□□ 0.48
SDC3-202ENST00000339394 NECAP2Q9NVZ3 263 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms