RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 HSPA12AO43301 675 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 NDUFS7O75251 213 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 IGHV3-7P01780 117 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 HEXAP06865 529 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR5AC1P0C628 307 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR8U9P0C7N5 309 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 IL2RGP31785 369 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 PPP1CCP36873 323 aaKnown RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 CDKN1AP38936 164 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 CEACAM6P40199 344 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 GZMKP49863 264 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 PPOXP50336 477 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 UCP3P55916 312 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 ABCA11PQ4W5N1 156 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 AVPI1Q5T686 147 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C11orf88Q6PI97 169 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 TCF23Q7RTU1 214 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 FAM219AQ8IW50 185 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 SLC38A6Q8IZM9 456 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C1orf87Q8N0U7 546 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR10V1Q8NGI7 309 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR2T35Q8NGX2 323 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR8U1Q8NH10 309 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 GRPEL2Q8TAA5 225 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 ZFAND1Q8TCF1 268 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 RTN4IP1Q8WWV3 396 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 ARL11Q969Q4 196 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 GALMQ96C23 342 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 SEC22AQ96IW7 307 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 SCGB3A2Q96PL1 93 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 TP53RKQ96S44 253 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 PHB2Q99623 299 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 DNTTIP1Q9H147 329 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 CLEC4MQ9H2X3 399 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 ZNF665Q9H7R5 613 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 PLSCR3Q9NRY6 295 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR2W1Q9Y3N9 320 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 DCHS2Q6V1P9 2916 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 DSCAML1Q8TD84 2053 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 TRAV38-1A0A0B4J264 116 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 DBX1A6NMT0 343 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 FAM25EA8MYX2 175 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 TNFRSF13BO14836 293 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 ADAM20O43506 726 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 RP2O75695 350 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR2A4O95047 310 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 IFNA2P01563 188 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 IGLV2-14P01704 120 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C1QBP02746 253 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 GIPP09681 153 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 NDUFB7P17568 137 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 LORP23490 312 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 ECI1P42126 302 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 ERVFRD-1P60508 538 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 PAX5Q02548 391 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 KCNJ8Q15842 424 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 HFEQ30201 348 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C6orf183Q5T699 404 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 TBC1D26Q86UD7 250 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 DTX2Q86UW9 622 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 SGPP2Q8IWX5 399 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 ZNF565Q8N9K5 539 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR5M8Q8NGP6 311 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 PPP1R35Q8TAP8 253 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 LURAP1Q96LR2 239 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR2A7Q96R45 310 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 TMEM246Q9BRR3 403 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 TRAF4Q9BUZ4 470 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 NAA60Q9H7X0 242 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C19orf12Q9NSK7 152 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OPN4Q9UHM6 478 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 RNF150Q9ULK6 438 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 MGAT4AQ9UM21 535 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 ARID1AO14497 2285 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C13orf42A0A1B0GVH6 325 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 NKX6-3A6NJ46 265 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 GPR31O00270 319 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 MPPED1O15442 326 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 PHF1O43189 567 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 MMP23AO75900 390 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 HOXB5P09067 269 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 CGB3P0DN86 165 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 CGB7P0DN87 165 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 DNASE1P24855 282 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 LUMP51884 338 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 ZNF273Q14593 569 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C17orf58Q2M2W7 97 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 CR1LQ2VPA4 569 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 LAMTOR1Q6IAA8 161 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 LHFPL5Q8TAF8 219 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 GLYATL2Q8WU03 294 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 LEAP2Q969E1 77 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C14orf79Q96F83 325 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 C5orf30Q96GV9 206 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 OR2S2Q9NQN1 319 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 CALYQ9NYX4 217 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 SLC25A10Q9UBX3 287 aaPredicted RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 KCNS2Q9ULS6 477 aa3.43□□□□□ -1.86
MCF2-201ENST00000338585 RBM7Q9Y580 266 aaKnown RBP3.43□□□□□ -1.86
MCF2-201ENST00000338585 FAM208BQ5VWN6 2430 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms