RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PDE6DO43924 150 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 AGFG2O95081 481 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 PRRX1P54821 245 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 FDX2Q6P4F2 183 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 PDPNQ86YL7 162 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 AQP10Q96PS8 301 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 RNF2Q99496 336 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 TMEM222Q9H0R3 208 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 FAM206AQ9NX38 181 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 CLN8Q9UBY8 286 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 HSF4Q9ULV5 492 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 SEMA7AO75326 666 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 NPY1RP25929 384 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 PPP1CCP36873 323 aaKnown RBP11.94□□□□□ -0.5
RTN4-202ENST00000337526 FGF12P61328 243 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 CEACAM21Q3KPI0 293 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 C19orf35Q6ZS72 473 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 MDP1Q86V88 176 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 C5orf66Q9H5L9 145 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 SCTP09683 121 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 OR5AL1P0C617 328 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
RTN4-202ENST00000337526 ZNF383Q8NA42 475 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 RSG1Q9BU20 258 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 TREM2Q9NZC2 230 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 TET1Q8NFU7 2136 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 HELTA6NFD8 242 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 PRF1P14222 555 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 FCARP24071 287 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 EGR4Q05215 589 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 HIST3H3Q16695 136 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 LRP11Q86VZ4 500 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 MARVELD3Q96A59 401 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 THYN1Q9P016 225 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 TUBD1Q9UJT1 453 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 GOLT1BQ9Y3E0 138 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 SYNGR1O43759 233 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 TNXAQ16473 311 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 INO80CQ6PI98 192 aaPredicted RBP11.93□□□□□ -0.5
RTN4-202ENST00000337526 ANGPTL4Q9BY76 406 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 G6PC2Q9NQR9 355 aa11.93□□□□□ -0.5
RTN4-202ENST00000337526 LYZP61626 148 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 MRPL54Q6P161 138 aaKnown RBP11.92□□□□□ -0.5
RTN4-202ENST00000337526 DPPA3Q6W0C5 159 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 TEX50A0A1B0GTY4 177 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 BMPR1BO00238 502 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 NEURL1O76050 574 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 HKR1P10072 659 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 HOXA6P31267 233 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 TEPPQ6URK8 271 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 BHLHA15Q7RTS1 189 aaPredicted RBP11.92□□□□□ -0.5
RTN4-202ENST00000337526 OR1B1Q8NGR6 318 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 PRNDQ9UKY0 176 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 ATAD5Q96QE3 1844 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 MDKP21741 143 aaPredicted RBP11.92□□□□□ -0.5
RTN4-202ENST00000337526 SLC25A45Q8N413 288 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 OR5AU1Q8NGC0 362 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 DOPEY2Q9Y3R5 2298 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 PPIHO43447 177 aaKnown RBP11.92□□□□□ -0.5
RTN4-202ENST00000337526 CSN3P07498 182 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 TIPARPQ7Z3E1 657 aaKnown RBP11.92□□□□□ -0.5
RTN4-202ENST00000337526 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 SGMS2Q8NHU3 365 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 SCARF2Q96GP6 870 aaPredicted RBP11.92□□□□□ -0.5
RTN4-202ENST00000337526 RNF7Q9UBF6 113 aa11.92□□□□□ -0.5
RTN4-202ENST00000337526 Q6ZN92 141 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 ZNF596Q8TC21 504 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 MYO16Q9Y6X6 1858 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 C17orf51A8MQB3 221 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 CD74P04233 296 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 SMIM17P0DL12 118 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 MMP9P14780 707 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 POM121Q96HA1 1249 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 HES7Q9BYE0 225 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 BET1LQ9NYM9 111 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 TMEM210A6NLX4 147 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 SNURFLB1AK76 121 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 CXorf1O96002 111 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 IER3P46695 156 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 HARBI1Q96MB7 349 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 ZNF665Q9H7R5 613 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 A0A0G2JK05 382 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 TMEM14DPA8MWL7 114 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 FAM157AC9JC47 383 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 H0Y980 276 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 M0R2Z0 102 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 CD1BP29016 333 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 IGLV3-21P80748 117 aaPredicted RBP11.91□□□□□ -0.5
RTN4-202ENST00000337526 ELOBQ15370 118 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
RTN4-202ENST00000337526 SCN10AQ9Y5Y9 1956 aa11.91□□□□□ -0.5
RTN4-202ENST00000337526 TCAPO15273 167 aa11.9□□□□□ -0.5
RTN4-202ENST00000337526 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
RTN4-202ENST00000337526 TGIF2LYQ8IUE0 185 aa11.9□□□□□ -0.5
RTN4-202ENST00000337526 RIF1Q5UIP0 2472 aaKnown RBP11.9□□□□□ -0.5
RTN4-202ENST00000337526 J3QR06 171 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms