RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 HIST1H2BLQ99880 126 aa16.95■□□□□ 0.3
CDCA4-201ENST00000336219 TRIOBPQ9H2D6 2365 aa16.95■□□□□ 0.3
CDCA4-201ENST00000336219 ELOA3CA0A087WX78 387 aaPredicted RBP16.95■□□□□ 0.3
CDCA4-201ENST00000336219 ZNF503-AS2A6NEH8 195 aa16.95■□□□□ 0.3
CDCA4-201ENST00000336219 IFNA5P01569 189 aa16.95■□□□□ 0.3
CDCA4-201ENST00000336219 LHX2P50458 406 aa16.95■□□□□ 0.3
CDCA4-201ENST00000336219 C6orf15Q6UXA7 325 aaPredicted RBP16.95■□□□□ 0.3
CDCA4-201ENST00000336219 OR5D13Q8NGL4 314 aa16.95■□□□□ 0.3
CDCA4-201ENST00000336219 ATP23Q9Y6H3 246 aa16.95■□□□□ 0.3
CDCA4-201ENST00000336219 CLDN34H7C241 214 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 WDR25Q64LD2 544 aaPredicted RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 BEND4Q6ZU67 534 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 TUSC5Q8IXB3 177 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 NECAP1Q8NC96 275 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 CA5BP1Q8WTZ4 195 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 APOBEC3DQ96AK3 386 aaPredicted RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 PRO3102Q9H379 93 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 KIAA1324LA8MWY0 1029 aaPredicted RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 H0Y980 276 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 TRAPPC2LH3BP13 241 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 CYB5R3P00387 301 aaPredicted RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 PDGFBP01127 241 aaPredicted RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 CTXN2P0C2S0 81 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 COX5BP10606 129 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 IGFBP7Q16270 282 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 DMRTC2Q8IXT2 367 aaPredicted RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 MKXQ8IYA7 352 aa16.94■□□□□ 0.3
CDCA4-201ENST00000336219 ZNF703Q9H7S9 590 aaPredicted RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 CISD1Q9NZ45 108 aaKnown RBP16.94■□□□□ 0.3
CDCA4-201ENST00000336219 TRAV39A0A0B4J263 110 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 HS3ST1O14792 307 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 SS18L1O75177 396 aaPredicted RBP16.93■□□□□ 0.3
CDCA4-201ENST00000336219 CELA3AP09093 270 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 F2RP25116 425 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 OR1K1Q8NGR3 316 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 RNASE11Q8TAA1 199 aaKnown RBP16.93■□□□□ 0.3
CDCA4-201ENST00000336219 CABLES2Q9BTV7 478 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 ZNF552Q9H707 407 aaPredicted RBP16.93■□□□□ 0.3
CDCA4-201ENST00000336219 SDF2L1Q9HCN8 221 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 LOXL2Q9Y4K0 774 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 CEBPZOSA8MTT3 80 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 SYNGR1O43759 233 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 DDTP30046 118 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 IL2RGP31785 369 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 RND2P52198 227 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 ELLP55199 621 aaPredicted RBP16.93■□□□□ 0.3
CDCA4-201ENST00000336219 CLDN18P56856 261 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 CLEC12BQ2HXU8 276 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 PCSK4Q6UW60 755 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 DPPA3Q6W0C5 159 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 SSX9Q7RTT3 188 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 H1FOOQ8IZA3 346 aaPredicted RBP16.93■□□□□ 0.3
CDCA4-201ENST00000336219 OR2M7Q8NG81 312 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 THOC3Q96J01 351 aaKnown RBP16.93■□□□□ 0.3
CDCA4-201ENST00000336219 OR14J1Q9UGF5 321 aa16.93■□□□□ 0.3
CDCA4-201ENST00000336219 KMT2EQ8IZD2 1858 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 A0A087X0M5 115 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 A0A1B0GX30 115 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 B4DEV8 164 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 NEURL1O76050 574 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 DFFBO76075 338 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 NGFP01138 241 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 CLN3Q13286 438 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 HAPLN4Q86UW8 402 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 UBALD1Q8TB05 177 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 RCC1LQ96I51 464 aaKnown RBP16.92■□□□□ 0.3
CDCA4-201ENST00000336219 FAM173AQ9BQD7 235 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 UFSP2Q9NUQ7 469 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 TNRC18O15417 2968 aaPredicted RBP16.92■□□□□ 0.3
CDCA4-201ENST00000336219 TRAV1-1A0A0B4J248 108 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 HMGB3O15347 200 aaKnown RBP16.92■□□□□ 0.3
CDCA4-201ENST00000336219 IGKV1-39P01597 117 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 IGKV1D-39P04432 117 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 OR5A2Q8NGI9 324 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 OR10G4Q8NGN3 311 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 RDH5Q92781 318 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 RBKSQ9H477 322 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 CACNG5Q9UF02 275 aa16.92■□□□□ 0.3
CDCA4-201ENST00000336219 ARHGAP21Q5T5U3 1957 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 KIAA2026Q5HYC2 2103 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 OR4X1Q8NH49 305 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 MRPL30Q8TCC3 161 aaKnown RBP16.91■□□□□ 0.3
CDCA4-201ENST00000336219 SCGB1C1Q8TD33 95 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 IL1F10Q8WWZ1 152 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 GTF3AQ92664 365 aaKnown RBP16.91■□□□□ 0.3
CDCA4-201ENST00000336219 IL22RA2Q969J5 263 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 PLK3Q9H4B4 646 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 ERRFI1Q9UJM3 462 aaPredicted RBP16.91■□□□□ 0.3
CDCA4-201ENST00000336219 ARGFXA6NJG6 315 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 SERPINE2P07093 398 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 NDUFB7P17568 137 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 PKIAP61925 76 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 REC114Q7Z4M0 266 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 OR1A1Q9P1Q5 309 aa16.91■□□□□ 0.3
CDCA4-201ENST00000336219 OR8G1Q15617 311 aa16.9■□□□□ 0.3
CDCA4-201ENST00000336219 ZNF525Q8N782 197 aa16.9■□□□□ 0.3
CDCA4-201ENST00000336219 POM121L2Q96KW2 1035 aa16.9■□□□□ 0.3
CDCA4-201ENST00000336219 HIST1H2AAQ96QV6 131 aa16.9■□□□□ 0.3
CDCA4-201ENST00000336219 HES7Q9BYE0 225 aa16.9■□□□□ 0.3
CDCA4-201ENST00000336219 HIPK2Q9H2X6 1198 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms