RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 IGHV3-72A0A0B4J1Y9 119 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 RAB19A4D1S5 217 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 LRRC3CA6NJW4 275 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 CHEK1O14757 476 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 ATP6V1FQ16864 119 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 SLC45A2Q9UMX9 530 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 IGHV1-69-2A0A0G2JMI3 117 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 ODAMA1E959 279 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 KLF4O43474 513 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 PSG2P11465 335 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 KLF9Q13886 244 aaPredicted RBP12.92□□□□□ -0.34
C9orf47-201ENST00000334490 UBE2V2Q15819 145 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 C1orf100Q5SVJ3 147 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 OR1L8Q8NGR8 309 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 ABHD14BQ96IU4 210 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 APOBEC3AP31941 199 aaPredicted RBP12.92□□□□□ -0.34
C9orf47-201ENST00000334490 DLL3Q9NYJ7 618 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 MRPS18CQ9Y3D5 142 aaKnown RBP12.92□□□□□ -0.34
C9orf47-201ENST00000334490 IGKV1D-43A0A0B4J1Z2 117 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 J3QW42 95 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 NEURL1O76050 574 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 GAPDHP04406 335 aaKnown RBP12.92□□□□□ -0.34
C9orf47-201ENST00000334490 CD40P25942 277 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 ARF6P62330 175 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 GCSAMQ8N6F7 178 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 C14orf79Q96F83 325 aa12.92□□□□□ -0.34
C9orf47-201ENST00000334490 FNDC1Q4ZHG4 1894 aaPredicted RBP12.92□□□□□ -0.34
C9orf47-201ENST00000334490 ADAM11O75078 769 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 SCTP09683 121 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 GFRA1P56159 465 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 TMEM33P57088 247 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 RHOBP62745 196 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 RPL7L1Q6DKI1 246 aaKnown RBP12.91□□□□□ -0.34
C9orf47-201ENST00000334490 BTNL8Q6UX41 500 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 BCL2L2Q92843 193 aaPredicted RBP12.91□□□□□ -0.34
C9orf47-201ENST00000334490 PIN1P1O15428 100 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 PLA2G10O15496 165 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 INHBBP09529 407 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 CTRB1P17538 263 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 IL24Q13007 206 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 MOGAT2Q3SYC2 334 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 CTRB2Q6GPI1 263 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 BLNKQ8WV28 456 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 TRBV5-7A0A0A0MS05 114 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 NKX2-6A6NCS4 301 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 CDK2AP1O14519 115 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 PJVKQ0ZLH3 352 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 ZNF79Q15937 498 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
C9orf47-201ENST00000334490 SERTM2A0A1B0GWG4 89 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 LHX2P50458 406 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 CLDN18P56856 261 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 ZNF788Q6ZQV5 615 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 CXorf58Q96LI9 332 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 SH2D2AQ9NP31 389 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 V9GYS6 101 aa12.91□□□□□ -0.34
C9orf47-201ENST00000334490 MGAMO43451 1857 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 OR2C1O95371 312 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 SLC25A53Q5H9E4 307 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FBLIM1Q8WUP2 373 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 ZNF837Q96EG3 531 aaPredicted RBP12.9□□□□□ -0.34
C9orf47-201ENST00000334490 TXN2Q99757 166 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 PPIAL4CA0A0B4J2A2 164 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A18PA6NE21 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A16PA6NEW6 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A20PA6NIJ5 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A8PA6NJQ4 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A22PA8MWA6 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A12PA8MX19 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A5PA8MXJ8 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 J3QR06 171 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 SLC25A5P05141 298 aaKnown RBP12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A15PP0C7V4 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A13PP0C7W8 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A14PP0C7W9 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 FAM90A24PP0C7X0 464 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 PPIAL4GP0DN37 164 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 CLEC12BQ2HXU8 276 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 MIDNQ504T8 468 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 NCR3LG1Q68D85 454 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 CLEC9AQ6UXN8 241 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 OR1L4Q8NGR5 311 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.34
C9orf47-201ENST00000334490 CDS2O95674 445 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 HPXP02790 462 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 CPN1P15169 458 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 CDC34P49427 236 aaPredicted RBP12.9□□□□□ -0.34
C9orf47-201ENST00000334490 BVESQ8NE79 360 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 OR1B1Q8NGR6 318 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 CCL19Q99731 98 aa12.9□□□□□ -0.34
C9orf47-201ENST00000334490 POMT1Q9Y6A1 747 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms