RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 GGACTQ9BVM4 153 aa10.47□□□□□ -0.73
VPS33B-201ENST00000333371 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
VPS33B-201ENST00000333371 C12orf49Q9H741 205 aa10.47□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A10PA6NDY2 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A18PA6NE21 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A16PA6NEW6 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A20PA6NIJ5 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A8PA6NJQ4 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A7PA6NKC0 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A22PA8MWA6 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A12PA8MX19 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A5PA8MXJ8 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A23PA8MXZ1 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A15PP0C7V4 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A13PP0C7W8 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A14PP0C7W9 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM90A24PP0C7X0 464 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 MAS1LP35410 378 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 WNT5AP41221 380 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 ZNF726P1Q15940 193 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 HES3Q5TGS1 186 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 FAM53AQ6NSI3 398 aaPredicted RBP10.46□□□□□ -0.73
VPS33B-201ENST00000333371 NUFIP2Q7Z417 695 aaKnown RBP10.46□□□□□ -0.73
VPS33B-201ENST00000333371 HAPLN4Q86UW8 402 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 APOBEC3DQ96AK3 386 aaPredicted RBP10.46□□□□□ -0.73
VPS33B-201ENST00000333371 NIPSNAP3BQ9BS92 247 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 DLL3Q9NYJ7 618 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 OR2W1Q9Y3N9 320 aa10.46□□□□□ -0.73
VPS33B-201ENST00000333371 NEURL1O76050 574 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 TNFSF15O95150 251 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 IGLV2-14P01704 120 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 TRGC2P03986 189 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 PYY3Q5JQD4 70 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 LINC00696Q6ZRV3 163 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 STX12Q86Y82 276 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 OR2M7Q8NG81 312 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 TMEM45BQ96B21 275 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 TVP23CQ96ET8 276 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 POM121L2Q96KW2 1035 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2AAQ96QV6 131 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 SSX3Q99909 188 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 B4GALT7Q9UBV7 327 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 PRSS50Q9UI38 385 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 KMT2EQ8IZD2 1858 aa10.46□□□□□ -0.74
VPS33B-201ENST00000333371 PCNX2A6NKB5 2137 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 SIRPB1O00241 398 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 IGHV2-70P01814 119 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 TLE4Q04727 773 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 BAXQ07812 192 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 IL24Q13007 206 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 C4orf17Q53FE4 359 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 C1QL4Q86Z23 238 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 OR5P3Q8WZ94 311 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 FAM173AQ9BQD7 235 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 TOLLIPQ9H0E2 274 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 ZNF703Q9H7S9 590 aaPredicted RBP10.45□□□□□ -0.74
VPS33B-201ENST00000333371 A0A1W2PR80 420 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HMGB3O15347 200 aaKnown RBP10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BKO60814 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 IGKV1-5P01602 117 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HSPB1P04792 205 aaKnown RBP10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BJP06899 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HOXA5P20719 270 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BOP23527 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BBP33778 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BDP58876 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BCP62807 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST2H2BEQ16778 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 C9orf152Q5JTZ5 239 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.45□□□□□ -0.74
VPS33B-201ENST00000333371 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 BEND4Q6ZU67 534 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 H1FOOQ8IZA3 346 aaPredicted RBP10.45□□□□□ -0.74
VPS33B-201ENST00000333371 FAM58AQ8N1B3 248 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BHQ93079 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BNQ99877 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 HIST1H2BMQ99879 126 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 TCEAL7Q9BRU2 100 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 TMPRSS5Q9H3S3 457 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 SMDT1Q9H4I9 107 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 KCNS2Q9ULS6 477 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 SVILO95425 2214 aa10.45□□□□□ -0.74
VPS33B-201ENST00000333371 IGKV3D-15A0A087WSY6 115 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 LOC102723971A0A1B0GUV8 181 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 BTBD17A6NE02 478 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 WDR1O75083 606 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 CEACAM1P13688 526 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 CD200P41217 278 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 ELLP55199 621 aaPredicted RBP10.44□□□□□ -0.74
VPS33B-201ENST00000333371 RPS16P62249 146 aaKnown RBP10.44□□□□□ -0.74
VPS33B-201ENST00000333371 HLA-DRB3P79483 266 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 DCAF10Q5QP82 559 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 OR5A2Q8NGI9 324 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 MRPS18CQ9Y3D5 142 aaKnown RBP10.44□□□□□ -0.74
VPS33B-201ENST00000333371 RBM7Q9Y580 266 aaKnown RBP10.44□□□□□ -0.74
VPS33B-201ENST00000333371 IFNA5P01569 189 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 OR1C1Q15619 314 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 SAXO1Q8IYX7 474 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 ZNF610Q8N9Z0 462 aa10.44□□□□□ -0.74
VPS33B-201ENST00000333371 OR8G5Q8NG78 346 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms