RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 CSMD2Q7Z408 3487 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 ASH1LQ9NR48 2969 aaKnown RBP9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 HECTD1Q9ULT8 2610 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 YLPM1P49750 1951 aaKnown RBP9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 hCG_2014768A0A024R1R8 64 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 IGHV3-43A0A0B4J1X8 118 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 IGKV1D-13A0A0B4J2D9 117 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 C22orf46C9J442 243 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 IGHV3-43DP0DP04 118 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 IGKV1-13P0DP09 117 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 ANXA7P20073 488 aaKnown RBP9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 DNASE1P24855 282 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 PPP1CCP36873 323 aaKnown RBP9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 ECI1P42126 302 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 DLX6P56179 175 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 DSCR9P59020 149 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 HERV-K104P61576 105 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 LMO4P61968 165 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 LTC4SQ16873 150 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 ESCO2Q56NI9 601 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 TMED4Q7Z7H5 227 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 LDLRAD3Q86YD5 345 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 TOMM40LQ969M1 308 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 C5orf66Q9H5L9 145 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 RAB9BQ9NP90 201 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 JPT1Q9UK76 154 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 GPR132Q9UNW8 380 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 OR2W1Q9Y3N9 320 aa9.95□□□□□ -0.82
TRIM49B-201ENST00000332682 IGHV4-61A0A0C4DH41 118 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 FAM172BPA6NC97 362 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 KIAA1324LA8MWY0 1029 aaPredicted RBP9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 MMP23AO75900 390 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 ZNF728P0DKX0 622 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 VSIG10L2P0DP72 767 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 PGAM2P15259 253 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 PI3P19957 117 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 CEACAM6P40199 344 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 UCP3P55916 312 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 PRAMEF5Q5TYX0 476 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 LRRC75A-AS1Q8N1F1 130 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 LY6G5BQ8NDX9 201 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 OR10V1Q8NGI7 309 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 NINJ1Q92982 152 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 MBD6Q96DN6 1003 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 BEX2Q9BXY8 128 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 BEX1Q9HBH7 125 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 IDI2-AS1Q9NZ38 188 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 GNG12Q9UBI6 72 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 ABCA2Q9BZC7 2435 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 MED13LQ71F56 2210 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 ARHGAP32A7KAX9 2087 aa9.94□□□□□ -0.82
TRIM49B-201ENST00000332682 A8MXK9 166 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 DHFRP00374 187 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 ZFP36P26651 326 aaKnown RBP9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 ERVFRD-1P60508 538 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 CLEC12BQ2HXU8 276 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 TMEM30BQ3MIR4 351 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 UTF1Q5T230 341 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 ADAD2Q8NCV1 583 aaKnown RBP9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 OR10A7Q8NGE5 316 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 SECTM1Q8WVN6 248 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 CAPSLQ8WWF8 208 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 TMEM230Q96A57 120 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 RAB39BQ96DA2 213 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 SCGB3A2Q96PL1 93 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 RTBDNQ9BSG5 229 aaPredicted RBP9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 ALX4Q9H161 411 aaPredicted RBP9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 GFOD1Q9NXC2 390 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 ZNF221Q9UK13 617 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 ALG5Q9Y673 324 aa9.93□□□□□ -0.82
TRIM49B-201ENST00000332682 LOC105371242A0A075B767 164 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 PPIAL4CA0A0B4J2A2 164 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 C7orf66A4D0T2 115 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 YPEL1O60688 119 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 PRAF2O60831 178 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 CTSDP07339 412 aaPredicted RBP9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 PPIAL4GP0DN37 164 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 MORN2Q502X0 79 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 SLC25A42Q86VD7 318 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 SLC38A6Q8IZM9 456 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 C11orf42Q8N5U0 333 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 OR52M1Q8NGK5 317 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 ZFAND1Q8TCF1 268 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 YPEL2Q96QA6 119 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 RSRP1Q9BUV0 290 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 SLC5A7Q9GZV3 580 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 C17orf98A8MV24 154 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 IL5P05113 134 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 LIPFP07098 398 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 OR8U9P0C7N5 309 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 NFYBP25208 207 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 GNRHRP30968 328 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 LUMP51884 338 aaPredicted RBP9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 TAS2R31P59538 309 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 CD276Q5ZPR3 534 aa9.92□□□□□ -0.82
TRIM49B-201ENST00000332682 GLDNQ6ZMI3 551 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms