RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 LRP4O75096 1905 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 PIGBOS1A0A0B4J2F0 54 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 CDKN1BP46527 198 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 ZNF295-AS1Q8N0V1 137 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 ZNF441Q8N8Z8 693 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 OR1N1Q8NGS0 311 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 TECTBQ96PL2 329 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 Q6ZPA2 131 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 CIB3Q96Q77 187 aaPredicted RBP20.84■□□□□ 0.93
SOX1-201ENST00000330949 ZNF442Q9H7R0 627 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 CD99P14209 185 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 CD33P20138 364 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 DRD1P21728 446 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 EPHA8P29322 1005 aaPredicted RBP20.84■□□□□ 0.93
SOX1-201ENST00000330949 PTTG1IPP53801 180 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 HIST3H3Q16695 136 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 TMEM144Q7Z5S9 345 aa20.84■□□□□ 0.93
SOX1-201ENST00000330949 H0Y980 276 aa20.83■□□□□ 0.93
SOX1-201ENST00000330949 SLC25A6P12236 298 aa20.83■□□□□ 0.93
SOX1-201ENST00000330949 EFNA3P52797 238 aa20.83■□□□□ 0.93
SOX1-201ENST00000330949 KLF3P57682 345 aaPredicted RBP20.83■□□□□ 0.93
SOX1-201ENST00000330949 CALHM1Q8IU99 346 aa20.83■□□□□ 0.93
SOX1-201ENST00000330949 BORCS8Q96FH0 119 aa20.83■□□□□ 0.93
SOX1-201ENST00000330949 PARD6GQ9BYG4 376 aaPredicted RBP20.83■□□□□ 0.93
SOX1-201ENST00000330949 IGKV1-27A0A075B6S5 117 aa20.83■□□□□ 0.92
SOX1-201ENST00000330949 TRBV11-1A0A0K0K1C0 115 aa20.83■□□□□ 0.92
SOX1-201ENST00000330949 TDGF1P13385 188 aa20.83■□□□□ 0.92
SOX1-201ENST00000330949 CHRNA7P36544 502 aa20.83■□□□□ 0.92
SOX1-201ENST00000330949 SOX8P57073 446 aa20.83■□□□□ 0.92
SOX1-201ENST00000330949 ORAOV1Q8WV07 137 aa20.83■□□□□ 0.92
SOX1-201ENST00000330949 WDR61Q9GZS3 305 aaKnown RBP20.83■□□□□ 0.92
SOX1-201ENST00000330949 CELSR3Q9NYQ7 3312 aa20.83■□□□□ 0.92
SOX1-201ENST00000330949 IGHV3-20A0A0C4DH32 117 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 M0R135 149 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 CAPZBP47756 277 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 FBXW4P57775 412 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 RPP25LQ8N5L8 163 aaKnown RBP20.82■□□□□ 0.92
SOX1-201ENST00000330949 VN1R17PQ8TDU5 208 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 ZNF799Q96GE5 643 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 GPHA2Q96T91 129 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 MSR1P21757 451 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 MRPS21P82921 87 aaKnown RBP20.82■□□□□ 0.92
SOX1-201ENST00000330949 NSDHLQ15738 373 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 KIAA0895LQ68EN5 471 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 LHFPL2Q6ZUX7 228 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 CPEB3Q8NE35 698 aaKnown RBP20.82■□□□□ 0.92
SOX1-201ENST00000330949 RYDENQ9NUL5 291 aaKnown RBP20.82■□□□□ 0.92
SOX1-201ENST00000330949 SHISA8B8ZZ34 492 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 FOXL1Q12952 345 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 OR4B1Q8NGF8 309 aa20.82■□□□□ 0.92
SOX1-201ENST00000330949 FREM2Q5SZK8 3169 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 NKX6-3A6NJ46 265 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 TLX3O43711 291 aaPredicted RBP20.81■□□□□ 0.92
SOX1-201ENST00000330949 OTX1P32242 354 aaPredicted RBP20.81■□□□□ 0.92
SOX1-201ENST00000330949 WIPI2Q9Y4P8 454 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 OPN1LWP04000 364 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 ESDP10768 282 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 TLE1Q04724 770 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 NEIL1Q96FI4 390 aaPredicted RBP20.81■□□□□ 0.92
SOX1-201ENST00000330949 HSPB9Q9BQS6 159 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 MMP17Q9ULZ9 603 aa20.81■□□□□ 0.92
SOX1-201ENST00000330949 KIAA1324LA8MWY0 1029 aaPredicted RBP20.8■□□□□ 0.92
SOX1-201ENST00000330949 BPIFB3P59826 476 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 ARL16Q0P5N6 197 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 AARDQ4LEZ3 155 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.8■□□□□ 0.92
SOX1-201ENST00000330949 PATZ1Q9HBE1 687 aaKnown RBP20.8■□□□□ 0.92
SOX1-201ENST00000330949 PSENENQ9NZ42 101 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 IL36GQ9NZH8 169 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 OR6C6A6NF89 314 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 SYNGR4O95473 234 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 OR5AU1Q8NGC0 362 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 GPR146Q96CH1 333 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 OXGR1Q96P68 337 aa20.8■□□□□ 0.92
SOX1-201ENST00000330949 SLC22A20A6NK97 555 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 CCDC85CA6NKD9 419 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 K7EP13 123 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 CCL25O15444 150 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 EFNA2O43921 213 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 ADMP35318 185 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 Q6ZS49 121 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 TAF15Q92804 592 aaKnown RBP eCLIP20.79■□□□□ 0.92
SOX1-201ENST00000330949 TIMM9Q9Y5J7 89 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 IGKV1-12A0A0C4DH73 117 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 SYNGR2O43760 224 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 IGKV1D-12P01611 117 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 RSPO1Q2MKA7 263 aaPredicted RBP20.79■□□□□ 0.92
SOX1-201ENST00000330949 OR5T1Q8NG75 326 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 SPTSSAQ969W0 71 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 PLA2G3Q9NZ20 509 aa20.79■□□□□ 0.92
SOX1-201ENST00000330949 CTXND1A0A1B0GTU2 59 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 HS3ST1O14792 307 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 MLNRO43193 412 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 CDKN1AP38936 164 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 MMDQ15546 238 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 TRAV39A0A0B4J263 110 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 A0A0G2JRQ6 117 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 S100GP29377 79 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 YPEL3P61236 119 aaPredicted RBP20.78■□□□□ 0.92
SOX1-201ENST00000330949 CCL28Q9NRJ3 127 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms