RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 WNT5BQ9H1J7 359 aa12.34□□□□□ -0.43
SNX20-202ENST00000330943 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
SNX20-202ENST00000330943 ZIC3O60481 467 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 EDN3P14138 238 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 CASP6P55212 293 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 HAPLN4Q86UW8 402 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 PYGO2Q9BRQ0 406 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 OR2H1Q9GZK4 316 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 AKIRIN1Q9H9L7 192 aaPredicted RBP12.33□□□□□ -0.44
SNX20-202ENST00000330943 C19orf25Q9UFG5 118 aaPredicted RBP12.33□□□□□ -0.44
SNX20-202ENST00000330943 CNOT1A5YKK6 2376 aaKnown RBP12.33□□□□□ -0.44
SNX20-202ENST00000330943 LRRC3CA6NJW4 275 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 SYNGR2O43760 224 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 LIFP15018 202 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 S100GP29377 79 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 RAB4BP61018 213 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 RPL23P62829 140 aaKnown RBP12.33□□□□□ -0.44
SNX20-202ENST00000330943 MEF2BQ02080 365 aaPredicted RBP12.33□□□□□ -0.44
SNX20-202ENST00000330943 COA6Q5JTJ3 125 aaKnown RBP12.33□□□□□ -0.44
SNX20-202ENST00000330943 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 ATP23Q9Y6H3 246 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.44
SNX20-202ENST00000330943 OR4A8P0C604 315 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 NUBP1P53384 320 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 DSCR4P56555 118 aaPredicted RBP12.32□□□□□ -0.44
SNX20-202ENST00000330943 CLDN15P56746 228 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 RNPS1Q15287 305 aaKnown RBP12.32□□□□□ -0.44
SNX20-202ENST00000330943 TESK1Q15569 626 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 MRPL41Q8IXM3 137 aaKnown RBP12.32□□□□□ -0.44
SNX20-202ENST00000330943 OR1K1Q8NGR3 316 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 FOXB1Q99853 325 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 UBE2ZQ9H832 354 aaPredicted RBP12.32□□□□□ -0.44
SNX20-202ENST00000330943 SLC39A9Q9NUM3 307 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 GVINP1Q7Z2Y8 2422 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 KBTBD11O94819 623 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 MMP7P09237 267 aaPredicted RBP12.32□□□□□ -0.44
SNX20-202ENST00000330943 SERF2P84101 59 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 CEACAM16Q2WEN9 425 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
SNX20-202ENST00000330943 KIAA1549Q9HCM3 1950 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 UBE2L5PA0A1B0GUS4 154 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 CD300LBA8K4G0 201 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 G0S2P27469 103 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 GPM6AP51674 278 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 HBG1P69891 147 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 HBG2P69892 147 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 KRTAP27-1Q3LI81 207 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 TMEM170AQ8WVE7 144 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 TECTBQ96PL2 329 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 RARRES3Q9UL19 164 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 DSPP15924 2871 aaKnown RBP12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A10PA6NDY2 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A18PA6NE21 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A16PA6NEW6 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A20PA6NIJ5 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A8PA6NJQ4 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A7PA6NKC0 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A22PA8MWA6 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A12PA8MX19 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A5PA8MXJ8 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A23PA8MXZ1 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 CTXN2P0C2S0 81 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A15PP0C7V4 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A13PP0C7W8 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A14PP0C7W9 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM90A24PP0C7X0 464 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FGF12P61328 243 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 PRSS8Q16651 343 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 SPANXN5Q5MJ07 72 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 PCSK4Q6UW60 755 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 AAED1Q7RTV5 226 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 OR56B2PQ8NGI1 322 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 CPT1CQ8TCG5 803 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 TMEM18Q96B42 140 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 ACY3Q96HD9 319 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 ADGRG7Q96K78 797 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 WFIKKN1Q96NZ8 548 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 OR4C12Q96R67 309 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 AGMATQ9BSE5 352 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 WDR61Q9GZS3 305 aaKnown RBP12.31□□□□□ -0.44
SNX20-202ENST00000330943 ERRFI1Q9UJM3 462 aaPredicted RBP12.31□□□□□ -0.44
SNX20-202ENST00000330943 HRASP01112 189 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 SRFP11831 508 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 SPINK2P20155 84 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 FAM3BP58499 235 aaPredicted RBP12.31□□□□□ -0.44
SNX20-202ENST00000330943 PAX5Q02548 391 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 SRSF7Q16629 238 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNX20-202ENST00000330943 TRIM61Q5EBN2 209 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 C20orf204Q6ZNR8 217 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 PINX1Q96BK5 328 aaKnown RBP12.31□□□□□ -0.44
SNX20-202ENST00000330943 PARLQ9H300 379 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 CRIM1Q9NZV1 1036 aa12.31□□□□□ -0.44
SNX20-202ENST00000330943 IFNL4K9M1U5 179 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 IGKV1-39P01597 117 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 IGKV1D-39P04432 117 aa12.3□□□□□ -0.44
SNX20-202ENST00000330943 CCNOP22674 350 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms