RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MANBALQ9NQG1 85 aa10.92□□□□□ -0.66
CCDC60-201ENST00000327554 IGKV1-6A0A0C4DH72 117 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 HMGB3O15347 200 aaKnown RBP10.91□□□□□ -0.66
CCDC60-201ENST00000327554 VENTXO95231 258 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 DRD1P21728 446 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 F2RP25116 425 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 CD82P27701 267 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.91□□□□□ -0.66
CCDC60-201ENST00000327554 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 OR4F4Q96R69 305 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 PSENENQ9NZ42 101 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 EML6Q6ZMW3 1958 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 DOCK11Q5JSL3 2073 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 IGLV3-32A0A0A0MS00 114 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 SIAH2O43255 324 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 SYNGR2O43760 224 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 CHRNA7P36544 502 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 TFPI2P48307 235 aa10.91□□□□□ -0.66
CCDC60-201ENST00000327554 TAF15Q92804 592 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC60-201ENST00000327554 A0A0U1RQK1 487 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 ZNF320A2RRD8 509 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 MLNRO43193 412 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 DHHO43323 396 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 TCF21O43680 179 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 NAPSAO96009 420 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 LINC00310P59036 64 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 BATFQ16520 125 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 ACSM6Q6P461 480 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 NUFIP2Q7Z417 695 aaKnown RBP10.9□□□□□ -0.66
CCDC60-201ENST00000327554 NFAM1Q8NET5 270 aaPredicted RBP10.9□□□□□ -0.66
CCDC60-201ENST00000327554 NEK7Q8TDX7 302 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 ZNF296Q8WUU4 475 aaPredicted RBP10.9□□□□□ -0.66
CCDC60-201ENST00000327554 RBM24Q9BX46 236 aaKnown RBP10.9□□□□□ -0.66
CCDC60-201ENST00000327554 PCED1AQ9H1Q7 454 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 SLC25A22Q9H936 323 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 AURKAIP1Q9NWT8 199 aaPredicted RBP10.9□□□□□ -0.66
CCDC60-201ENST00000327554 WNT16Q9UBV4 365 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 ZFP30Q9Y2G7 519 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 GON4LQ3T8J9 2241 aa10.9□□□□□ -0.66
CCDC60-201ENST00000327554 PDGFBP01127 241 aaPredicted RBP10.9□□□□□ -0.67
CCDC60-201ENST00000327554 NPPCP23582 126 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 HBG1P69891 147 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 HBG2P69892 147 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 SRSF7Q16629 238 aaKnown RBP eCLIP10.9□□□□□ -0.67
CCDC60-201ENST00000327554 OR2M3Q8NG83 312 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 CMTM2Q8TAZ6 248 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 ZNF837Q96EG3 531 aaPredicted RBP10.9□□□□□ -0.67
CCDC60-201ENST00000327554 DNAJC4Q9NNZ3 241 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 CACNG5Q9UF02 275 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 PAM16Q9Y3D7 125 aa10.9□□□□□ -0.67
CCDC60-201ENST00000327554 UBE2L5PA0A1B0GUS4 154 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 LNP1A1A4G5 178 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 IGKV1-39P01597 117 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 IGKV1D-39P04432 117 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 PSG2P11465 335 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 CDKN1AP38936 164 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 FUT6P51993 359 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 C1QTNF9BB2RNN3 333 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 SYNGR3O43761 229 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 GABRG2P18507 467 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 ADMP35318 185 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 BLKP51451 505 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 PPP1CBP62140 327 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 RANP62826 216 aaKnown RBP10.89□□□□□ -0.67
CCDC60-201ENST00000327554 TMEM183BQ1AE95 376 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 TRIM61Q5EBN2 209 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 COL5A1-AS1Q5SY13 56 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 OR5T1Q8NG75 326 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 OR10V1Q8NGI7 309 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 NEIL1Q96FI4 390 aaPredicted RBP10.89□□□□□ -0.67
CCDC60-201ENST00000327554 OR51B6Q9H340 312 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
CCDC60-201ENST00000327554 KIAA1549Q9HCM3 1950 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 CTXND1A0A1B0GTU2 59 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 TCRBV21S2A2A0A5A6 115 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 WNT2P09544 360 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 COMPP49747 757 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-201ENST00000327554 RAB7AP51149 207 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 SOX8P57073 446 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 TCF23Q7RTU1 214 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 LINC01551Q86U37 167 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 C11orf42Q8N5U0 333 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 OR10G3Q8NGC4 313 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 OR51H1Q8NH63 302 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 MSL2Q9HCI7 577 aa10.88□□□□□ -0.67
CCDC60-201ENST00000327554 GRIFINA4D1Z8 144 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 SERPINE2P07093 398 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 CD99P14209 185 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 EPHA8P29322 1005 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-201ENST00000327554 RBX1P62877 108 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 FAM27BQ5VT28 67 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 PLCXD3Q63HM9 321 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 PCSK4Q6UW60 755 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 ZNF611Q8N823 705 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 AGBL5Q8NDL9 886 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 OR1K1Q8NGR3 316 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 METTL7AQ9H8H3 244 aa10.87□□□□□ -0.67
CCDC60-201ENST00000327554 hCG_38984A0A1B0GV85 526 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms