RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 CEBPGP53567 150 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 IGFBP7Q16270 282 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 ZNF880Q6PDB4 577 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 KIAA1456Q9P272 454 aa13.65□□□□□ -0.22
USHBP1-202ENST00000324554 ZNF727A8MUV8 499 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 H3BQ15 152 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 KLRC4-KLRK1H3BQV0 150 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 WISP2O76076 250 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 SRP19P09132 144 aaKnown RBP13.64□□□□□ -0.23
USHBP1-202ENST00000324554 MAS1LP35410 378 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 ZNF324BQ6AW86 544 aaPredicted RBP13.64□□□□□ -0.23
USHBP1-202ENST00000324554 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 BCL2L2Q92843 193 aaPredicted RBP13.64□□□□□ -0.23
USHBP1-202ENST00000324554 IL22RA2Q969J5 263 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 OR2W1Q9Y3N9 320 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 LINC00587B1AMM8 73 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 H0YL77 283 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 CD82P27701 267 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 HLA-DRB3P79483 266 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 ICAM4Q14773 271 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 SLC10A1Q14973 349 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 DEFB109BQ30KR1 87 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 SPATA46Q5T0L3 261 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 HEPN1Q6WQI6 88 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 MDP1Q86V88 176 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 ZNF295-AS1Q8N0V1 137 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 RAB39BQ96DA2 213 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 PKIBQ9C010 78 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 OR51I2Q9H344 312 aa13.64□□□□□ -0.23
USHBP1-202ENST00000324554 H3BP45 60 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 ATXN7O15265 892 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-202ENST00000324554 S100A9P06702 114 aaKnown RBP13.63□□□□□ -0.23
USHBP1-202ENST00000324554 F2RP25116 425 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 BAXQ07812 192 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 IZUMO4Q1ZYL8 232 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 ZNF766Q5HY98 468 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 FBXW9Q5XUX1 488 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 H1FOOQ8IZA3 346 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-202ENST00000324554 OR10J5Q8NHC4 309 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 MUCL1Q96DR8 90 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 NIT2Q9NQR4 276 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 ESPL1Q14674 2120 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 BTBD17A6NE02 478 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 CLN5O75503 358 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 CYB561D1Q8N8Q1 229 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 GNPNAT1Q96EK6 184 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-202ENST00000324554 ZNF251Q9BRH9 671 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 CABLES2Q9BTV7 478 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 GP6Q9HCN6 339 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 GSN-AS1Q9NRJ2 163 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 MMP24Q9Y5R2 645 aa13.63□□□□□ -0.23
USHBP1-202ENST00000324554 SCAF4O95104 1147 aaKnown RBP13.62□□□□□ -0.23
USHBP1-202ENST00000324554 MMP9P14780 707 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 CD46P15529 392 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 OR51H1Q8NH63 302 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 NANOS1Q8WY41 292 aaKnown RBP13.62□□□□□ -0.23
USHBP1-202ENST00000324554 WDYHV1Q96HA8 205 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 SPRR3Q9UBC9 169 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 ERRFI1Q9UJM3 462 aaPredicted RBP13.62□□□□□ -0.23
USHBP1-202ENST00000324554 ATMQ13315 3056 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 J3QT63 122 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 AP4M1O00189 453 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 WRBO00258 174 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 FABP1P07148 127 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 Q6P435 159 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 SNIP1Q8TAD8 396 aaKnown RBP13.62□□□□□ -0.23
USHBP1-202ENST00000324554 ATP5SQ99766 215 aa13.62□□□□□ -0.23
USHBP1-202ENST00000324554 KIAA1324LA8MWY0 1029 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-202ENST00000324554 TXNL1O43396 289 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 NCMAPQ5T1S8 102 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 AKR1C8PQ5T2L2 129 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 MYPOPQ86VE0 399 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-202ENST00000324554 C1QL4Q86Z23 238 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 CLDND2Q8NHS1 167 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 GPR146Q96CH1 333 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 OR1A1Q9P1Q5 309 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 DEGS1O15121 323 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 PSG2P11465 335 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 S100GP29377 79 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 TAGLN2P37802 199 aaKnown RBP13.61□□□□□ -0.23
USHBP1-202ENST00000324554 TAS2R30P59541 319 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 DLK1P80370 383 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 TMEM267Q0VDI3 215 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-202ENST00000324554 ZNF506Q5JVG8 444 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 Q6ZRM9 215 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 WDR86Q86TI4 376 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 ZNF429Q86V71 674 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 IL1F10Q8WWZ1 152 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 WSB1Q9Y6I7 421 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 MED12LQ86YW9 2145 aa13.61□□□□□ -0.23
USHBP1-202ENST00000324554 PPIHO43447 177 aaKnown RBP13.6□□□□□ -0.23
USHBP1-202ENST00000324554 RPS10P46783 165 aaKnown RBP13.6□□□□□ -0.23
USHBP1-202ENST00000324554 UBE2KP61086 200 aa13.6□□□□□ -0.23
USHBP1-202ENST00000324554 P4HA3Q7Z4N8 544 aa13.6□□□□□ -0.23
USHBP1-202ENST00000324554 UNKLQ9H9P5 680 aaKnown RBP13.6□□□□□ -0.23
USHBP1-202ENST00000324554 TRGV5A0A0B4J1U4 118 aa13.6□□□□□ -0.23
USHBP1-202ENST00000324554 TRAV39A0A0B4J263 110 aa13.6□□□□□ -0.23
USHBP1-202ENST00000324554 NPIPB11E5RHQ5 1161 aa13.6□□□□□ -0.23
USHBP1-202ENST00000324554 IFNA17P01571 189 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms