RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 HSPB7Q9UBY9 170 aa6.2□□□□□ -1.42
SMC1A-201ENST00000322213 CORTO00230 105 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 G6PCP35575 357 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 CEACAM6P40199 344 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 P2RY6Q15077 328 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 LTC4SQ16873 150 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 FAM219AQ8IW50 185 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 WDFY1Q8IWB7 410 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 RFLNBQ8N5W9 214 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 BHLHE23Q8NDY6 225 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR2M7Q8NG81 312 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR8A1Q8NGG7 326 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 SPPL3Q8TCT6 385 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 ALG14Q96F25 216 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 MENTQ9BUN1 341 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR2W1Q9Y3N9 320 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 HS3ST3A1Q9Y663 406 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 PDPNQ86YL7 162 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 APCDD1LQ8NCL9 501 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 QTRT1Q9BXR0 403 aaKnown RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 A0A1B0GTH9 108 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF891A8MT65 544 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 UMODP07911 640 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 RUNX3Q13761 415 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 ERASQ7Z444 233 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 POC1AQ8NBT0 407 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR2T6Q8NHC8 308 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 TBL2Q9Y4P3 447 aaKnown RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF462Q96JM2 2506 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 TRAV9-1A0A075B6T8 112 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR5B21A6NL26 309 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 LRRC30A6NM36 301 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 BCAT2O15382 392 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 HOXC4P09017 264 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 DCDP81605 110 aaKnown RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR10X1Q8NGY0 326 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 PSMG3Q9BT73 122 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 FAM206AQ9NX38 181 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM30CPA0ZSE6 113 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 H3BMH7 237 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 TRAT1Q6PIZ9 186 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR5A2Q8NGI9 324 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 CD99L2Q8TCZ2 262 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 MED29Q9NX70 200 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 IFITM10A6NMD0 228 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF542PQ5EBM4 170 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 BIVMQ86UB2 503 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 C11orf40Q8WZ69 217 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 MRPL24Q96A35 216 aaKnown RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 GPA33Q99795 319 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 TECRQ9NZ01 308 aaKnown RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 TBC1D29Q9UFV1 150 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 ANKHD1Q8IWZ3 2542 aaKnown RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 RAMP1O60894 148 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 NEURL1O76050 574 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 P01737 135 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 SSX8Q7RTT4 187 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 OR2W5A6NFC9 320 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 SMPD2O60906 423 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 PIAS2O75928 621 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 CRYAAP02489 173 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 CD5P06127 495 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 DRD1P21728 446 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 FUT5Q11128 374 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 EIF3IQ13347 325 aaKnown RBP6.19□□□□□ -1.42
SMC1A-201ENST00000322213 FBLN7Q53RD9 439 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 S1PR3Q99500 378 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 COMMD5Q9GZQ3 224 aa6.19□□□□□ -1.42
SMC1A-201ENST00000322213 SOCS1O15524 211 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF217O75362 1048 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 RIGQ13278 110 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 ABHD17BQ5VST6 288 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 BATF2Q8N1L9 274 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 IP6K3Q96PC2 410 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 GPR179Q6PRD1 2367 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 KMT5CQ86Y97 462 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-201ENST00000322213 KCNE4Q8WWG9 221 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 OR2D2Q9H210 308 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 HYAL3O43820 417 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-201ENST00000322213 MPDU1O75352 247 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 IGHEP01854 428 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 HMGA1P17096 107 aaKnown RBP6.18□□□□□ -1.42
SMC1A-201ENST00000322213 CDAP32320 146 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 MYEOVQ96EZ4 313 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 SPSB2Q99619 263 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 OCIAD1Q9NX40 245 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 YBX2Q9Y2T7 364 aaKnown RBP6.18□□□□□ -1.42
SMC1A-201ENST00000322213 EFSO43281 561 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 GDF1P27539 372 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 GBGT1Q8N5D6 347 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 OR1L4Q8NGR5 311 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 RDH5Q92781 318 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 A0A1B0GTI1 187 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 APOBEC3DQ96AK3 386 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-201ENST00000322213 PAGE4O60829 102 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 KBTBD11O94819 623 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 UNQ9370/PRO34162Q6UXP9 181 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms