RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 NOL4LQ96MY1 436 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-201ENST00000317716 ZNF385AQ96PM9 386 aaKnown RBP6.53□□□□□ -1.36
CDHR3-201ENST00000317716 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 GNG12Q9UBI6 72 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 VAX2Q9UIW0 290 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 IGHV3-43A0A0B4J1X8 118 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 KIR2DS1A0A191URI9 304 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 PGPEP1LA6NFU8 196 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 HSBP1L1C9JCN9 74 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 MS4A18H0YCH9 400 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 IGHV4-34P06331 123 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 IGHV3-43DP0DP04 118 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 MDH2P40926 338 aaKnown RBP6.53□□□□□ -1.36
CDHR3-201ENST00000317716 KIR2DS4P43632 304 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 TNFRSF9Q07011 255 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 KIR2DS1Q14954 304 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 CEBPEQ15744 281 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 MS4A18Q3C1V0 323 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 ARSJQ5FYB0 599 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-201ENST00000317716 ST8SIA1Q92185 356 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 OXGR1Q96P68 337 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 NOSIPQ9Y314 301 aaKnown RBP6.53□□□□□ -1.36
CDHR3-201ENST00000317716 PPIAL4AQ9Y536 164 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 KLF2Q9Y5W3 355 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-201ENST00000317716 DENND4CQ5VZ89 1909 aa6.53□□□□□ -1.36
CDHR3-201ENST00000317716 LOC102725191A0A1B0GVB3 256 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 A0A1B0GX78 115 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 RAB29O14966 203 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 SYNGR2O43760 224 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 OR7C2O60412 319 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 MRPL33O75394 65 aaKnown RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 HSBP1O75506 76 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 TOX4O94842 621 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 AMBPP02760 352 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 CD55P08174 381 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 PNRC1Q12796 327 aaPredicted RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 HIKESHIQ53FT3 197 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 TCF23Q7RTU1 214 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 H2BFWTQ7Z2G1 175 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 ZNF664Q8N3J9 261 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 OR1L3Q8NH93 324 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 CPT1CQ8TCG5 803 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 SSMEM1Q8WWF3 244 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 NANOS1Q8WY41 292 aaKnown RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 TECRQ9NZ01 308 aaKnown RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 TRDCB7Z8K6 153 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 DXOO77932 396 aaKnown RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 NDUFB4O95168 129 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 CEACAM1P13688 526 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 VDAC1P21796 283 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 FHL1Q13642 323 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 TMEM183AQ8IXX5 376 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 ZNF552Q9H707 407 aaPredicted RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 DNAJC4Q9NNZ3 241 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 MYOZ1Q9NP98 299 aaPredicted RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 OBP2BQ9NPH6 170 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 CLN8Q9UBY8 286 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 BPTFQ12830 3046 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 CHD3Q12873 2000 aaKnown RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 DUXBA0A1W2PPF3 345 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 LRP5LA4QPB2 252 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 LIPT2A6NK58 231 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 ZNF253O75346 499 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 SMIM10L1P0DMW3 83 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 OR10J1P30954 320 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 CAMPP49913 170 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 TNFSF10P50591 281 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 EIF3IQ13347 325 aaKnown RBP6.52□□□□□ -1.37
CDHR3-201ENST00000317716 TMEM187Q14656 261 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 SNAI3Q3KNW1 292 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 ASPHD2Q6ICH7 369 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 SLC22A18ASQ8N1D0 253 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 LRRC75AQ8NAA5 344 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 ZNF519Q8TB69 540 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 PTX4Q96A99 478 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 SMIM10Q96HG1 83 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 BOD1Q96IK1 185 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 STARD10Q9Y365 291 aa6.52□□□□□ -1.37
CDHR3-201ENST00000317716 SNURFLB1AK76 121 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 HSPB1P04792 205 aaKnown RBP6.51□□□□□ -1.37
CDHR3-201ENST00000317716 SP9P0CG40 484 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 FGF5P12034 268 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 FOLR2P14207 255 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 CBLN1P23435 193 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 CD82P27701 267 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 HOXC12P31275 282 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 NPBWR2P48146 333 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 IL24Q13007 206 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 ICAM4Q14773 271 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 ZNF658BQ4V348 819 aaPredicted RBP6.51□□□□□ -1.37
CDHR3-201ENST00000317716 PRAMEF5Q5TYX0 476 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 PRAMEF6Q5VXH4 476 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
CDHR3-201ENST00000317716 SLC35E3Q7Z769 313 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 OR5AU1Q8NGC0 362 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 POC1BQ8TC44 478 aa6.51□□□□□ -1.37
CDHR3-201ENST00000317716 TECTBQ96PL2 329 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms