RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 LIN7CQ9NUP9 197 aaKnown RBP14.05□□□□□ -0.16
TPM1-203ENST00000317516 TPRKBQ9Y3C4 175 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 ANKRD65E5RJM6 399 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 AP4M1O00189 453 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 MPIG6BO95866 241 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 SRMP19623 302 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 VHLP40337 213 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 MED22Q15528 200 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 RBM48Q5RL73 367 aaKnown RBP14.04□□□□□ -0.16
TPM1-203ENST00000317516 FOXB2Q5VYV0 432 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 SIGIRRQ6IA17 410 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 Q6ZPA2 131 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 CEACAM19Q7Z692 300 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 ZNF439Q8NDP4 499 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 KCNG3Q8TAE7 436 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 RASL11BQ9BPW5 248 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 GPR61Q9BZJ8 451 aa14.04□□□□□ -0.16
TPM1-203ENST00000317516 SLC31A2O15432 143 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 RGS11O94810 467 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 ZNF134P52741 427 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 RPL23AP62750 156 aaKnown RBP14.03□□□□□ -0.16
TPM1-203ENST00000317516 HTD2P86397 168 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 MORN2Q502X0 79 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 HSD17B12Q53GQ0 312 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 NKAPLQ5M9Q1 402 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 C1orf100Q5SVJ3 147 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 FAM53AQ6NSI3 398 aaPredicted RBP14.03□□□□□ -0.16
TPM1-203ENST00000317516 TEX38Q6PEX7 206 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 STPG2Q8N412 459 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 Q8N6K4 173 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 UFD1Q92890 307 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 GALMQ96C23 342 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 LINC00527Q9UJ94 153 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 JPT1Q9UK76 154 aa14.03□□□□□ -0.16
TPM1-203ENST00000317516 NUDT19A8MXV4 375 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 LANCL1O43813 399 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 RRP9O43818 475 aaKnown RBP14.02□□□□□ -0.17
TPM1-203ENST00000317516 VSIG8P0DPA2 414 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 GPR12P47775 334 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 INSL4Q14641 139 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 PNLIPRP3Q17RR3 467 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 FAM27D1Q5T7N8 215 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 LRRTM1Q86UE6 522 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 Q8N9W7 124 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 S1PR3Q99500 378 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 TMEM59Q9BXS4 323 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 AURKAIP1Q9NWT8 199 aaPredicted RBP14.02□□□□□ -0.17
TPM1-203ENST00000317516 ABRACLQ9P1F3 81 aa14.02□□□□□ -0.17
TPM1-203ENST00000317516 YPEL1O60688 119 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 HTR2CP28335 458 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 RANBP1P43487 201 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 GP2P55259 537 aaKnown RBP14.01□□□□□ -0.17
TPM1-203ENST00000317516 RPS27AP62979 156 aaKnown RBP14.01□□□□□ -0.17
TPM1-203ENST00000317516 TRAM1Q15629 374 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 OR2W3Q7Z3T1 314 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 MRPL30Q8TCC3 161 aaKnown RBP14.01□□□□□ -0.17
TPM1-203ENST00000317516 YPEL2Q96QA6 119 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 ABHD14AQ9BUJ0 271 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 MCRIP2Q9BUT9 160 aaKnown RBP14.01□□□□□ -0.17
TPM1-203ENST00000317516 PLSCR3Q9NRY6 295 aa14.01□□□□□ -0.17
TPM1-203ENST00000317516 NKX1-2Q9UD57 310 aaPredicted RBP14.01□□□□□ -0.17
TPM1-203ENST00000317516 LSM2Q9Y333 95 aaKnown RBP14.01□□□□□ -0.17
TPM1-203ENST00000317516 ZNF736B4DX44 427 aaPredicted RBP14□□□□□ -0.17
TPM1-203ENST00000317516 BPNT1O95861 308 aa14□□□□□ -0.17
TPM1-203ENST00000317516 UCHL1P09936 223 aa14□□□□□ -0.17
TPM1-203ENST00000317516 CHATP28329 748 aa14□□□□□ -0.17
TPM1-203ENST00000317516 SOX6P35712 828 aa14□□□□□ -0.17
TPM1-203ENST00000317516 MYCNOSP40205 109 aa14□□□□□ -0.17
TPM1-203ENST00000317516 THBS3P49746 956 aa14□□□□□ -0.17
TPM1-203ENST00000317516 LY6G6FQ5SQ64 297 aa14□□□□□ -0.17
TPM1-203ENST00000317516 LIPKQ5VXJ0 399 aa14□□□□□ -0.17
TPM1-203ENST00000317516 OR10K2Q6IF99 312 aa14□□□□□ -0.17
TPM1-203ENST00000317516 LINC00482Q8N8I6 264 aa14□□□□□ -0.17
TPM1-203ENST00000317516 OR52L2PQ8NGH6 319 aa14□□□□□ -0.17
TPM1-203ENST00000317516 OR6M1Q8NGM8 313 aa14□□□□□ -0.17
TPM1-203ENST00000317516 DPF1Q92782 380 aa14□□□□□ -0.17
TPM1-203ENST00000317516 FAAP24Q9BTP7 215 aa14□□□□□ -0.17
TPM1-203ENST00000317516 TM2D1Q9BX74 207 aa14□□□□□ -0.17
TPM1-203ENST00000317516 VCX3BQ9H321 246 aa14□□□□□ -0.17
TPM1-203ENST00000317516 PLEKHJ1Q9NW61 149 aa14□□□□□ -0.17
TPM1-203ENST00000317516 STEAP1Q9UHE8 339 aa14□□□□□ -0.17
TPM1-203ENST00000317516 LINC01548A6NM66 108 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 SLC22A1O15245 554 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 RGS10O43665 173 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 ARL6IP5O75915 188 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 HSMCR30P0CW71 290 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 CD37P11049 281 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 PSMA1P25786 263 aaKnown RBP13.99□□□□□ -0.17
TPM1-203ENST00000317516 BLVRBP30043 206 aaPredicted RBP13.99□□□□□ -0.17
TPM1-203ENST00000317516 PPP1CCP36873 323 aaKnown RBP13.99□□□□□ -0.17
TPM1-203ENST00000317516 AQP4P55087 323 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 IRF3Q14653 427 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 CXorf66Q5JRM2 361 aaPredicted RBP13.99□□□□□ -0.17
TPM1-203ENST00000317516 C6orf201Q7Z4U5 140 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 ZNF695Q8IW36 515 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 MRPL41Q8IXM3 137 aaKnown RBP13.99□□□□□ -0.17
TPM1-203ENST00000317516 KLHL30-AS1Q8NEE0 82 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 TMEM203Q969S6 136 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 SULT4A1Q9BR01 284 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 URM1Q9BTM9 101 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms