RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 OR2I1PQ8NGU4 316 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 FGF22Q9HCT0 170 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 TNFRSF4P43489 277 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 H2BFSP57053 126 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 MEF2BQ02080 365 aaPredicted RBP7.69□□□□□ -1.18
USF3-201ENST00000316407 SMAGPQ0VAQ4 97 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 OR4X1Q8NH49 305 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 ASCL3Q9NQ33 180 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 KBTBD11O94819 623 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 ZNF660Q6AZW8 331 aaPredicted RBP7.69□□□□□ -1.18
USF3-201ENST00000316407 RFLNBQ8N5W9 214 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 BCL2L10Q9HD36 194 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 OR10S1Q8NGN2 331 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 TMEM38BQ9NVV0 291 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 TSC2P49815 1807 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 OR10D3Q8NH80 312 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 HILPDAQ9Y5L2 63 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 RBPJQ06330 500 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 OR8B12Q8NGG6 310 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 CLDN16Q9Y5I7 305 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 PWWP2BQ6NUJ5 590 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 MTURNQ8N3F0 131 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 ZFP64Q9NPA5 681 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 WIPI2Q9Y4P8 454 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 XIRP1Q702N8 1843 aaKnown RBP7.69□□□□□ -1.18
USF3-201ENST00000316407 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.69□□□□□ -1.18
USF3-201ENST00000316407 OR2T8A6NH00 312 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 GDF9O60383 454 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 PLAUP00749 431 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 COX6CP09669 75 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 TCRBV5S1A1TA0A578 114 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 ZNF124Q15973 351 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 STXBP6Q8NFX7 210 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 A0A1B0GWB2 263 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 ST8SIA5O15466 376 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 PATE4P0C8F1 98 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 ZNF83P51522 516 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 TMEM178AQ8NBL3 297 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 HS3ST3A1Q9Y663 406 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 SPANXN1Q5VSR9 72 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 NYNRINQ9P2P1 1898 aaKnown RBP7.68□□□□□ -1.18
USF3-201ENST00000316407 M0R296 226 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 ARL14EPLP0DKL9 152 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 HOXB3P14651 431 aaPredicted RBP7.68□□□□□ -1.18
USF3-201ENST00000316407 BIVMQ86UB2 503 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 TMEM183AQ8IXX5 376 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 IL23AQ9NPF7 189 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 AUP1Q9Y679 476 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 PLCE1Q9P212 2302 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 TRAV12-3A0A0B4J271 114 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 HOXD4P09016 255 aaPredicted RBP7.68□□□□□ -1.18
USF3-201ENST00000316407 RTP5Q14D33 572 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 C18orf15Q96N68 181 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 SLC25A33Q9BSK2 321 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 NUDT10Q8NFP7 164 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 NUDT11Q96G61 164 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 PDCD6O75340 191 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 GALP22466 123 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 RPS23P62266 143 aaKnown RBP7.68□□□□□ -1.18
USF3-201ENST00000316407 C2orf83Q53S99 150 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 OR11H4Q8NGC9 324 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 SGK494Q96LW2 274 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 OR11G2Q8NGC1 345 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 LSM10Q969L4 123 aaKnown RBP7.68□□□□□ -1.18
USF3-201ENST00000316407 C4orf45Q96LM5 186 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 RALGAPA2Q2PPJ7 1873 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 A0A1W2PPC4 97 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 SRSF5Q13243 272 aaKnown RBP7.68□□□□□ -1.18
USF3-201ENST00000316407 H1FOOQ8IZA3 346 aaPredicted RBP7.68□□□□□ -1.18
USF3-201ENST00000316407 MRGPRX4Q96LA9 322 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 GABRG3Q99928 467 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 TMEM167BQ9NRX6 74 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 AMY1AP04745 511 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 CKS2P33552 79 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 P2RY6Q15077 328 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 ANKRD55Q3KP44 614 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 RNFT1Q5M7Z0 435 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 HIST1H2BAQ96A08 127 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 NHSQ6T4R5 1651 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 TRDCB7Z8K6 153 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 PQLC2Q6ZP29 291 aa7.68□□□□□ -1.18
USF3-201ENST00000316407 USP54Q70EL1 1684 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 METAP1P53582 386 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 FAM19A2Q8N3H0 131 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 WBP2Q969T9 261 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 CCL28Q9NRJ3 127 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 CACFD1Q9UGQ2 172 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 PLXNB1O43157 2135 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 PPYP01298 95 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 MYF5P13349 255 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 Q5BKY6 102 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 IBA57Q5T440 356 aaKnown RBP7.67□□□□□ -1.18
USF3-201ENST00000316407 OR5A1Q8NGJ0 315 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 RASL11BQ9BPW5 248 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 RBKSQ9H477 322 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 GPR3P46089 330 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 TMEM177Q53S58 311 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 TEPPQ6URK8 271 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 DNAJB12Q9NXW2 375 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms