RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 HIST1H2AAQ96QV6 131 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 PRDM14Q9GZV8 571 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 VPS13AQ96RL7 3174 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 CTXN2P0C2S0 81 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 OR4A8P0C604 315 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 PSG2P11465 335 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 GZMHP20718 246 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 TUBG1P23258 451 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 TNFRSF9Q07011 255 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 ARL16Q0P5N6 197 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 OR10D3Q8NH80 312 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 MBD3L1Q8WWY6 194 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 THOC3Q96J01 351 aaKnown RBP11.46□□□□□ -0.57
SKA3-202ENST00000314759 XKRY2A2RUG3 117 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 SOX15O60248 233 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 CCNOP22674 350 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 SRD5A2P31213 254 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 MLF1P58340 268 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 ABHD3Q8WU67 409 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 RAB40CQ96S21 281 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.58
SKA3-202ENST00000314759 SNHG12Q9BXW3 62 aa11.46□□□□□ -0.58
SKA3-202ENST00000314759 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
SKA3-202ENST00000314759 FRYLO94915 3013 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 A0A1B0GWJ7 208 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 OPN1MWP04001 364 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 SERPINE2P07093 398 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 FGF5P12034 268 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 CCL2P13500 99 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 EPHA8P29322 1005 aaPredicted RBP11.45□□□□□ -0.58
SKA3-202ENST00000314759 ERVS71-1P61550 626 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 SLC10A1Q14973 349 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 ZNF324BQ6AW86 544 aaPredicted RBP11.45□□□□□ -0.58
SKA3-202ENST00000314759 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 RBM14Q96PK6 669 aaKnown RBP11.45□□□□□ -0.58
SKA3-202ENST00000314759 DUSP23Q9BVJ7 150 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 NCKAP5O14513 1909 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 CNOT4O95628 575 aaKnown RBP11.45□□□□□ -0.58
SKA3-202ENST00000314759 METTL15P1P0C7V9 234 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 FAM180AQ6UWF9 173 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 SAXO1Q8IYX7 474 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 AGBL5Q8NDL9 886 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 BEND2Q8NDZ0 799 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 MRPL30Q8TCC3 161 aaKnown RBP11.45□□□□□ -0.58
SKA3-202ENST00000314759 KCNE4Q8WWG9 221 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 ADGRG7Q96K78 797 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 WFIKKN1Q96NZ8 548 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 FSCN3Q9NQT6 498 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 DCAF16Q9NXF7 216 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 LAMP3Q9UQV4 416 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 OR2W1Q9Y3N9 320 aa11.45□□□□□ -0.58
SKA3-202ENST00000314759 PI4KAP42356 2102 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 TGOLN2O43493 480 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 IAPPP10997 89 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 SLC25A6P12236 298 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 TCEAL6Q6IPX3 200 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 C16orf82Q7Z2V1 217 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 HAPLN4Q86UW8 402 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 ZNF525Q8N782 197 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 SRD5A3Q9H8P0 318 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 ERRFI1Q9UJM3 462 aaPredicted RBP11.44□□□□□ -0.58
SKA3-202ENST00000314759 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 SYNGR1O43759 233 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 IGKV1-39P01597 117 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 IGKV1D-39P04432 117 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 PFN1P07737 140 aaKnown RBP11.44□□□□□ -0.58
SKA3-202ENST00000314759 ADIRFQ15847 76 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 CEACAM21Q3KPI0 293 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
SKA3-202ENST00000314759 ZNF845Q96IR2 970 aaPredicted RBP11.44□□□□□ -0.58
SKA3-202ENST00000314759 ELOVL1Q9BW60 279 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 CACNG5Q9UF02 275 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 FREM1Q5H8C1 2179 aa11.44□□□□□ -0.58
SKA3-202ENST00000314759 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 TRAPPC2LH3BP13 241 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 SYNGR2O43760 224 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 SPINK2P20155 84 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 ZNF66Q6ZN08 573 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 CLDN23Q96B33 292 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 P2RX4Q99571 388 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 PHF7Q9BWX1 381 aaPredicted RBP11.43□□□□□ -0.58
SKA3-202ENST00000314759 VAX2Q9UIW0 290 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 ARHGAP21Q5T5U3 1957 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 HS3ST1O14792 307 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
SKA3-202ENST00000314759 RAB4BP61018 213 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 C9orf135Q5VTT2 229 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 ZDHHC23Q8IYP9 409 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 OR10J5Q8NHC4 309 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 TMEM37Q8WXS4 190 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 ZNF488Q96MN9 340 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
SKA3-202ENST00000314759 RBKSQ9H477 322 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 PRDM6Q9NQX0 595 aa11.43□□□□□ -0.58
SKA3-202ENST00000314759 CBLN4Q9NTU7 201 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms