RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 C14orf144Q96I85 54 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
MKS1-201ENST00000313863 MAP1LC3BQ9GZQ8 125 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 SRD5A3Q9H8P0 318 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 LAMA1P25391 3075 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 A0A0G2JRQ6 117 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 SELLP14151 372 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 DUSP3P51452 185 aaPredicted RBP11.79□□□□□ -0.52
MKS1-201ENST00000313863 REC114Q7Z4M0 266 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 TGIF2LYQ8IUE0 185 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 FAM58AQ8N1B3 248 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 PKIBQ9C010 78 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 FGF23Q9GZV9 251 aaPredicted RBP11.79□□□□□ -0.52
MKS1-201ENST00000313863 CDH20Q9HBT6 801 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 OR14J1Q9UGF5 321 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 BOKQ9UMX3 212 aaPredicted RBP11.79□□□□□ -0.52
MKS1-201ENST00000313863 ARGFXA6NJG6 315 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 SS18L1O75177 396 aaPredicted RBP11.79□□□□□ -0.52
MKS1-201ENST00000313863 METTL15P1P0C7V9 234 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 GNG3P63215 75 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 PLP2Q04941 152 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 TMEM241Q24JQ0 296 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 HLA-BQ31612 363 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 LBHQ53QV2 105 aaPredicted RBP11.79□□□□□ -0.52
MKS1-201ENST00000313863 NCR3LG1Q68D85 454 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 CYP2G1PQ6ZSU1 146 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 TMEM183AQ8IXX5 376 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 OR5P3Q8WZ94 311 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 OR5B12Q96R08 314 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 WDR61Q9GZS3 305 aaKnown RBP11.79□□□□□ -0.52
MKS1-201ENST00000313863 TMEM9BQ9NQ34 198 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 SLC39A9Q9NUM3 307 aa11.79□□□□□ -0.52
MKS1-201ENST00000313863 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 DVL1O14640 695 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 ZNF737O75373 536 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 MBP02144 154 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 RFPL3SP0C7P2 107 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 IAPPP10997 89 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 GFRA1P56159 465 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 ZNF726P1Q15940 193 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 ATP6V1FQ16864 119 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 GFI1BQ5VTD9 330 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 C5orf24Q7Z6I8 188 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 HS3ST6Q96QI5 342 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 SMIM7Q9BQ49 75 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 IL36RNQ9UBH0 155 aa11.78□□□□□ -0.52
MKS1-201ENST00000313863 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.77□□□□□ -0.52
MKS1-201ENST00000313863 HS3ST1O14792 307 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 SYNGR1O43759 233 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 SYNGR4O95473 234 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 BTF3P20290 206 aaKnown RBP11.77□□□□□ -0.52
MKS1-201ENST00000313863 DDTP30046 118 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 PSMB3P49720 205 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 MEF2BQ02080 365 aaPredicted RBP11.77□□□□□ -0.52
MKS1-201ENST00000313863 ZFP36L1Q07352 338 aaKnown RBP11.77□□□□□ -0.52
MKS1-201ENST00000313863 PDZD11Q5EBL8 140 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 WDR25Q64LD2 544 aaPredicted RBP11.77□□□□□ -0.52
MKS1-201ENST00000313863 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.52
MKS1-201ENST00000313863 RDH5Q92781 318 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 TAF15Q92804 592 aaKnown RBP eCLIP11.77□□□□□ -0.52
MKS1-201ENST00000313863 LHX4Q969G2 390 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 DLL3Q9NYJ7 618 aa11.77□□□□□ -0.52
MKS1-201ENST00000313863 RBM7Q9Y580 266 aaKnown RBP11.77□□□□□ -0.52
MKS1-201ENST00000313863 WDR87Q6ZQQ6 2873 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 TRAV24A0A0B4J272 114 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 PHOX2AO14813 284 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 KBTBD11O94819 623 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 PGA5P0DJD9 388 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 CYB561P49447 251 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.53
MKS1-201ENST00000313863 SLC38A11Q08AI6 406 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 GAMTQ14353 236 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 SSX9Q7RTT3 188 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 ZNF845Q96IR2 970 aaPredicted RBP11.77□□□□□ -0.53
MKS1-201ENST00000313863 HIST1H2BLQ99880 126 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 PYGO2Q9BRQ0 406 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 GPR87Q9BY21 358 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 VSIRQ9H7M9 311 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 UBE2ZQ9H832 354 aaPredicted RBP11.77□□□□□ -0.53
MKS1-201ENST00000313863 MANBALQ9NQG1 85 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 PRSS50Q9UI38 385 aa11.77□□□□□ -0.53
MKS1-201ENST00000313863 NTN3O00634 580 aaPredicted RBP11.76□□□□□ -0.53
MKS1-201ENST00000313863 IGHV3-9P01782 118 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 FGF7P21781 194 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 CLN3Q13286 438 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 ADIRFQ15847 76 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 Q6ZRM9 215 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 CENPVQ7Z7K6 275 aaPredicted RBP11.76□□□□□ -0.53
MKS1-201ENST00000313863 Q8IYB0 196 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 IL1F10Q8WWZ1 152 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 ACY3Q96HD9 319 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 SNX22Q96L94 193 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 B4GALT7Q9UBV7 327 aa11.76□□□□□ -0.53
MKS1-201ENST00000313863 H7BYZ3 331 aa11.75□□□□□ -0.53
MKS1-201ENST00000313863 J3QT63 122 aa11.75□□□□□ -0.53
MKS1-201ENST00000313863 GDF9O60383 454 aa11.75□□□□□ -0.53
MKS1-201ENST00000313863 IGKV1-39P01597 117 aa11.75□□□□□ -0.53
MKS1-201ENST00000313863 IGKV1-5P01602 117 aa11.75□□□□□ -0.53
MKS1-201ENST00000313863 IGKV1D-39P04432 117 aa11.75□□□□□ -0.53
MKS1-201ENST00000313863 CCL4P13236 92 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms