RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 WDR13Q9H1Z4 485 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 VSIG4Q9Y279 399 aa7.17□□□□□ -1.26
VPS41-202ENST00000310301 A0A1B0GV72 72 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 C7orf66A4D0T2 115 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 CDC42EP2O14613 210 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 CA6P23280 308 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 MMP16P51512 607 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 Q5PR19 223 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 DNLZQ5SXM8 178 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 DCAF12L2Q5VW00 463 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 TMEM108Q6UXF1 575 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 FRRS1LQ9P0K9 344 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 FAM186AA6NE01 2351 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 NKX2-6A6NCS4 301 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 MPZL1O95297 269 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 CDX1P47902 265 aaPredicted RBP7.16□□□□□ -1.26
VPS41-202ENST00000310301 DMRTA1Q5VZB9 504 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 ZNF660Q6AZW8 331 aaPredicted RBP7.16□□□□□ -1.26
VPS41-202ENST00000310301 ARL6IP6Q8N6S5 226 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 PCGF1Q9BSM1 259 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 DNAJB12Q9NXW2 375 aaKnown RBP7.16□□□□□ -1.26
VPS41-202ENST00000310301 ZNF391Q9UJN7 358 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 TRDCB7Z8K6 153 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 KLF7O75840 302 aaPredicted RBP7.16□□□□□ -1.26
VPS41-202ENST00000310301 EMP1P54849 157 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 IRF3Q14653 427 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 ZNF841Q6ZN19 808 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 FAM60AQ9NP50 221 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 GPR27Q9NS67 375 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 FOXJ2Q9P0K8 574 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 ATG2BQ96BY7 2078 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 A0A1W2PN81 502 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 CXorf1O96002 111 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 ORM1P02763 201 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 RPL30P62888 115 aaKnown RBP7.16□□□□□ -1.26
VPS41-202ENST00000310301 ZNF141Q15928 474 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 MICBQ29980 383 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 C1orf185Q5T7R7 199 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 GLRX5Q86SX6 157 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 ZG16BQ96DA0 208 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 TMEM204Q9BSN7 226 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 H7C2G1 150 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 CDX4O14627 284 aaPredicted RBP7.16□□□□□ -1.26
VPS41-202ENST00000310301 PTP4A3O75365 173 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 HAND1O96004 215 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 ZNF117Q03924 483 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 ZNF362Q5T0B9 420 aaPredicted RBP7.16□□□□□ -1.26
VPS41-202ENST00000310301 GAPTQ8N292 157 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 LINC01555Q8NAE3 123 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 SMDT1Q9H4I9 107 aa7.16□□□□□ -1.26
VPS41-202ENST00000310301 CTXND1A0A1B0GTU2 59 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 J3QKU1 62 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 PITX3O75364 302 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 VSIG10L2P0DP72 767 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 KLK2P20151 261 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 PMCHL1Q16048 86 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 DEGS2Q6QHC5 323 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 OR10AC1Q8NH08 325 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 RBM14Q96PK6 669 aaKnown RBP7.15□□□□□ -1.26
VPS41-202ENST00000310301 ASXL3Q9C0F0 2248 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 SH2D7A6NKC9 451 aaPredicted RBP7.15□□□□□ -1.26
VPS41-202ENST00000310301 SPRY3O43610 288 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 GOSR1O95249 250 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 CFDP00746 253 aaPredicted RBP7.15□□□□□ -1.26
VPS41-202ENST00000310301 HIST1H1EP10412 219 aaKnown RBP7.15□□□□□ -1.26
VPS41-202ENST00000310301 BCL2P10415 239 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 CD1BP29016 333 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 CLDN18P56856 261 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 SLC35B1P78383 322 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 NAAAQ02083 359 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 OR1L1Q8NH94 360 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 CES1P1Q9UKY3 287 aa7.15□□□□□ -1.26
VPS41-202ENST00000310301 MS4A18H0YCH9 400 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 M0QZ24 198 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 CD74P04233 296 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 MS4A18Q3C1V0 323 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 ZNF774Q6NX45 483 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 IL36GQ9NZH8 169 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 ZNF107Q9UII5 783 aaPredicted RBP7.15□□□□□ -1.27
VPS41-202ENST00000310301 NPTNQ9Y639 398 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 AHRRA9YTQ3 701 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 ALG1L2C9J202 215 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 ZNF205O95201 554 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 VDAC1P21796 283 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 WIPI1Q5MNZ9 446 aaPredicted RBP7.15□□□□□ -1.27
VPS41-202ENST00000310301 H1FOOQ8IZA3 346 aaPredicted RBP7.15□□□□□ -1.27
VPS41-202ENST00000310301 OR2Z1Q8NG97 314 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 OR1N2Q8NGR9 330 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 R3HDM4Q96D70 268 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 TLNRD1Q9H1K6 362 aa7.15□□□□□ -1.27
VPS41-202ENST00000310301 SEBOXQ9HB31 216 aaPredicted RBP7.15□□□□□ -1.27
VPS41-202ENST00000310301 CNOT1A5YKK6 2376 aaKnown RBP7.15□□□□□ -1.27
VPS41-202ENST00000310301 LOC101059948A0A1B0GTJ6 334 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 PQLC2LA1A4F0 135 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 RECKO95980 971 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 PPP1CAP62136 330 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms