RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 NUP50Q9UKX7 468 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 TRAV39A0A0B4J263 110 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 TOR1AO14656 332 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 DFFBO76075 338 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 IGHV1-46P01743 117 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 ZNF66Q6ZN08 573 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 CRIM1Q9NZV1 1036 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 APOA2P02652 100 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 CFHR2P36980 270 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 FAM219AQ8IW50 185 aa13.16□□□□□ -0.3
CGGBP1-201ENST00000309534 OR11H4Q8NGC9 324 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 OR4A16Q8NH70 328 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 RNF141Q8WVD5 230 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 HEATR1Q9H583 2144 aaKnown RBP13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 A0A1B0GU03 582 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 PGLYRP1O75594 196 aaPredicted RBP13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 LMO1P25800 156 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 GATA4P43694 442 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 HMGN3Q15651 99 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 CIB3Q96Q77 187 aaPredicted RBP13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 RCL1Q9Y2P8 373 aaKnown RBP13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 NPIPB11E5RHQ5 1161 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 LPAR6P43657 344 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 CLLU1Q5K131 121 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 NCMAPQ5T1S8 102 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 BAP18Q8IXM2 172 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 OR1L1Q8NH94 360 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 LINC01560Q8TB33 94 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 RAB40CQ96S21 281 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 SLC25A10Q9UBX3 287 aaPredicted RBP13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 DPRXA6NFQ7 191 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 CEBPZOSA8MTT3 80 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 LYZL2Q7Z4W2 148 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 SLC35G3Q8N808 338 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 PRR13Q9NZ81 148 aa13.15□□□□□ -0.3
CGGBP1-201ENST00000309534 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 I3L521 148 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 P2RY1P47900 373 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 WDR86Q86TI4 376 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 SLC7A5P1Q8MH63 180 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 SPAG16Q8N0X2 631 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 SEBOXQ9HB31 216 aaPredicted RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 ZNF729A6NN14 1252 aaPredicted RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 PTBP3O95758 552 aaKnown RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 CYB5R3P00387 301 aaPredicted RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 GLIPR1P48060 266 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 SRSF4Q08170 494 aaKnown RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 SNTB1Q13884 538 aaKnown RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 Q3ZCU0 254 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 Q6ZR03 302 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 ZNF818PQ6ZRF7 136 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 MUC15Q8N387 334 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 DMRTA2Q96SC8 542 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 FAM212BQ9NTI7 297 aaPredicted RBP13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 TAS2R3Q9NYW6 316 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 POMT1Q9Y6A1 747 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 C12orf77C9JDV5 145 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 M0R1X1 148 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 ST8SIA5O15466 376 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 LY6DQ14210 128 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 ZNF709Q8N972 641 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 BVESQ8NE79 360 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 CCL13Q99616 98 aa13.14□□□□□ -0.31
CGGBP1-201ENST00000309534 GYPAP02724 150 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 MMP9P14780 707 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 CRIP3Q6Q6R5 217 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 LRTM2Q8N967 370 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 OR1S2Q8NGQ3 325 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 TSNAXQ99598 290 aaKnown RBP13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 SMIM3Q9BZL3 60 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 HES4Q9HCC6 221 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 OR1A1Q9P1Q5 309 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 IGHV3-43A0A0B4J1X8 118 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 IGHV3-43DP0DP04 118 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 CALYQ9NYX4 217 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 TNRC6AQ8NDV7 1962 aaKnown RBP13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 CXCL2P19875 107 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 C2orf68Q2NKX9 166 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 LY6G6FQ5SQ64 297 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 OR52L2PQ8NGH6 319 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 IFNA17P01571 189 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 PPP1CCP36873 323 aaKnown RBP13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 HTD2P86397 168 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 PRAMEF5Q5TYX0 476 aa13.13□□□□□ -0.31
CGGBP1-201ENST00000309534 SSSCA1O60232 199 aa13.12□□□□□ -0.31
CGGBP1-201ENST00000309534 UCP1P25874 307 aa13.12□□□□□ -0.31
CGGBP1-201ENST00000309534 ZNF581Q9P0T4 197 aa13.12□□□□□ -0.31
CGGBP1-201ENST00000309534 IGHV1-69-2A0A0G2JMI3 117 aa13.12□□□□□ -0.31
CGGBP1-201ENST00000309534 ZNF880Q6PDB4 577 aa13.12□□□□□ -0.31
CGGBP1-201ENST00000309534 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms