RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 RAC2P15153 192 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 AGAP20933 346 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 PSG4Q00888 419 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 FDX2Q6P4F2 183 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 SLC25A47Q6Q0C1 308 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 C6orf15Q6UXA7 325 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-201ENST00000309428 C1orf210Q8IVY1 113 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 SIGLEC12Q96PQ1 595 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 MRPL13Q9BYD1 178 aaKnown RBP10.92□□□□□ -0.66
RETREG3-201ENST00000309428 TMEM100Q9NV29 134 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 PRSS50Q9UI38 385 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 ISG15P05161 165 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 CST2P09228 141 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 MPLP40238 635 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 EDDM3BP56851 147 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 TAS2R30P59541 319 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF90Q03938 601 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 HGFACQ04756 655 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 EDARADDQ8WWZ3 215 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 TRAPPC1Q9Y5R8 145 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 CRYM-AS1A6NIL9 109 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 AQP7O14520 342 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 APLNRP35414 380 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H3AP68431 136 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 OR5I1Q13606 314 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 ENDOGQ14249 297 aaKnown RBP10.91□□□□□ -0.66
RETREG3-201ENST00000309428 FAM166AQ6J272 317 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 C16orf82Q7Z2V1 217 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 RFESDQ8TAC1 157 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 FOXJ2Q9P0K8 574 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 KIAA1456Q9P272 454 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 ZGRF1Q86YA3 2104 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF732B4DXR9 585 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 PDCD6O75340 191 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 TNFSF15O95150 251 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 MGST1P10620 155 aaKnown RBP10.91□□□□□ -0.66
RETREG3-201ENST00000309428 PMCHP20382 165 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 SLC35B1P78383 322 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF124Q15973 351 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 ATP5SQ99766 215 aa10.91□□□□□ -0.66
RETREG3-201ENST00000309428 DMXL1Q9Y485 3027 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 LY6G6EA0A0G2JKS1 128 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
RETREG3-201ENST00000309428 EXT1Q16394 746 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 CALHM1Q8IU99 346 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 SIRT7Q9NRC8 400 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 RPRMQ9NS64 109 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 U3KQA8 63 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF17P17021 662 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 HLA-GP17693 338 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 KITLGP21583 273 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 EDDM3AQ14507 147 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 DPPA3Q6W0C5 159 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 REC114Q7Z4M0 266 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 DDA1Q9BW61 102 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 STRADBQ9C0K7 418 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 PLEKHA3Q9HB20 300 aa10.9□□□□□ -0.66
RETREG3-201ENST00000309428 GRIFINA4D1Z8 144 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 SLC31A2O15432 143 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 LYZL6O75951 148 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 MELTFP08582 738 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 DEFA4P12838 97 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 CA6P23280 308 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 SUMO3P55854 103 aaPredicted RBP10.9□□□□□ -0.67
RETREG3-201ENST00000309428 SRSF6Q13247 344 aaKnown RBP10.9□□□□□ -0.67
RETREG3-201ENST00000309428 CPT1CQ8TCG5 803 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 KCNIP1Q9NZI2 227 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 TMEM131Q92545 1883 aa10.9□□□□□ -0.67
RETREG3-201ENST00000309428 LOC102725191A0A1B0GVB3 256 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 ANKRD30BLA7E2S9 258 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 SLC10A1Q14973 349 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 OR1C1Q15619 314 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 OR2V1Q8NHB1 315 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 MARS2Q96GW9 593 aaKnown RBP10.89□□□□□ -0.67
RETREG3-201ENST00000309428 C14orf144Q96I85 54 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 FKBP11Q9NYL4 201 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 PITPNC1Q9UKF7 332 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 RPH3ALQ9UNE2 315 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 M0R143 59 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 PAGE4O60829 102 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 HIST1H1BP16401 226 aaKnown RBP10.89□□□□□ -0.67
RETREG3-201ENST00000309428 RAC1P63000 192 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 IQCJQ1A5X6 159 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 HEPN1Q6WQI6 88 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 TPRX1Q8N7U7 411 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 DMBX1Q8NFW5 382 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 VN1R17PQ8TDU5 208 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 TBX15Q96SF7 602 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 HEYLQ9NQ87 328 aaPredicted RBP10.89□□□□□ -0.67
RETREG3-201ENST00000309428 PSG2P11465 335 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 TCL1AP56279 114 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 SPEM2Q0P670 501 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 OR2T10Q8NGZ9 312 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 TUBA4BQ9H853 241 aa10.89□□□□□ -0.67
RETREG3-201ENST00000309428 DEFB108AA8MXU0 73 aa10.88□□□□□ -0.67
RETREG3-201ENST00000309428 DEGS1O15121 323 aa10.88□□□□□ -0.67
RETREG3-201ENST00000309428 OPN1MWP04001 364 aa10.88□□□□□ -0.67
RETREG3-201ENST00000309428 SRP19P09132 144 aaKnown RBP10.88□□□□□ -0.67
RETREG3-201ENST00000309428 OPN1MW2P0DN77 364 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms