RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PMCHL2Q9BQD1 86 aa13.4□□□□□ -0.26
LEMD3-201ENST00000308330 LIN7CQ9NUP9 197 aaKnown RBP13.4□□□□□ -0.26
LEMD3-201ENST00000308330 H3BMH7 237 aa13.4□□□□□ -0.26
LEMD3-201ENST00000308330 DANCRP0C864 163 aa13.4□□□□□ -0.26
LEMD3-201ENST00000308330 SCGB1A1P11684 91 aa13.4□□□□□ -0.26
LEMD3-201ENST00000308330 MYBPHQ13203 477 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 WIPI1Q5MNZ9 446 aaPredicted RBP13.39□□□□□ -0.27
LEMD3-201ENST00000308330 SMIM20Q8N5G0 67 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 CT55Q8WUE5 264 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 TMEM170AQ8WVE7 144 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 GUCD1Q96NT3 240 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 IGHV5-10-1A0A0J9YXX1 117 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 DLL1O00548 723 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 OR7C1O76099 320 aaPredicted RBP13.39□□□□□ -0.27
LEMD3-201ENST00000308330 Q1RN00 199 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 PRTGQ2VWP7 1150 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 GLIPR1L1Q6UWM5 242 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 CLUHP3Q96NS8 147 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 PROCRQ9UNN8 238 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 KCNE1BA0A087WTH5 132 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 TRGV5A0A0B4J1U4 118 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 CDIPTO14735 213 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 CXCL1P09341 107 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 ATP6V0CP27449 155 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 BCL2L10Q9HD36 194 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 ONECUT2O95948 504 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 HKR1P10072 659 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 ASCL4Q6XD76 172 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 OR4C3Q8NH37 302 aa13.39□□□□□ -0.27
LEMD3-201ENST00000308330 APOBEC4Q8WW27 367 aaKnown RBP13.39□□□□□ -0.27
LEMD3-201ENST00000308330 ZNF256Q9Y2P7 627 aaPredicted RBP13.39□□□□□ -0.27
LEMD3-201ENST00000308330 C7orf71A4D174 169 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 C22orf46C9J442 243 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 CD200R1LQ6Q8B3 271 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 C19orf48Q6RUI8 117 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 OR10G3Q8NGC4 313 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 OR8B3Q8NGG8 313 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 SCN3AQ9NY46 2000 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 MUC6Q6W4X9 2439 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 RNF222A6NCQ9 220 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 OR5B21A6NL26 309 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 BTCP35070 178 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 RPL27P61353 136 aaKnown RBP13.38□□□□□ -0.27
LEMD3-201ENST00000308330 SHBQ15464 509 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 SPANXN5Q5MJ07 72 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 CDPF1Q6NVV7 123 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 UNQ6494/PRO21346Q6UXR6 183 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 GJC3Q8NFK1 279 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 DMBX1Q8NFW5 382 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 MRPL18Q9H0U6 180 aaKnown RBP13.38□□□□□ -0.27
LEMD3-201ENST00000308330 THYN1Q9P016 225 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 COA3Q9Y2R0 106 aaPredicted RBP13.38□□□□□ -0.27
LEMD3-201ENST00000308330 DEGS1O15121 323 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 MT-ND6P03923 174 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 SMIM13P0DJ93 91 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 AZU1P20160 251 aa13.38□□□□□ -0.27
LEMD3-201ENST00000308330 MRPL30Q8TCC3 161 aaKnown RBP13.38□□□□□ -0.27
LEMD3-201ENST00000308330 TDRD15B5MCY1 1934 aaKnown RBP13.38□□□□□ -0.27
LEMD3-201ENST00000308330 OR4P4Q8NGL7 312 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 LIPFP07098 398 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 GCSHP23434 173 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 MFAP4P55083 255 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 ANKRD37Q7Z713 158 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 H1FOOQ8IZA3 346 aaPredicted RBP13.37□□□□□ -0.27
LEMD3-201ENST00000308330 FAM89BQ8N5H3 189 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 SPANXA1Q9NS26 97 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 PRR13Q9NZ81 148 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 SLC45A2Q9UMX9 530 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 A0A087WUJ7 227 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 IGHV3-15A0A0B4J1V0 119 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 A0A0G2JMM0 328 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 A0A1W2PPB8 328 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 KIR3DP1A8MWS1 328 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 H3BP45 60 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 MST1P26927 711 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 FAM219AQ8IW50 185 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 GMPPAQ96IJ6 420 aaPredicted RBP13.37□□□□□ -0.27
LEMD3-201ENST00000308330 TSPAN32Q96QS1 320 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 MESP1Q9BRJ9 268 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 SPXQ9BT56 116 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 MED29Q9NX70 200 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 CES1P1Q9UKY3 287 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 FOXF1Q12946 379 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 RNASEH2CQ8TDP1 164 aaKnown RBP13.37□□□□□ -0.27
LEMD3-201ENST00000308330 C5orf30Q96GV9 206 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 GPX7Q96SL4 187 aaPredicted RBP13.37□□□□□ -0.27
LEMD3-201ENST00000308330 C20orf144Q9BQM9 153 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 MRPS18CQ9Y3D5 142 aaKnown RBP13.37□□□□□ -0.27
LEMD3-201ENST00000308330 ALPK2Q86TB3 2170 aa13.37□□□□□ -0.27
LEMD3-201ENST00000308330 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.36□□□□□ -0.27
LEMD3-201ENST00000308330 IGHV1-69-2A0A0G2JMI3 117 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 ODAMA1E959 279 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 CRYAAP02489 173 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 CRYBA4P53673 196 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 FUT5Q11128 374 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 SLC25A45Q8N413 288 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 FER1L6-AS1Q8NA97 138 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 PELI1Q96FA3 418 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 HDGFL3Q9Y3E1 203 aa13.36□□□□□ -0.27
LEMD3-201ENST00000308330 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms