RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MFNGO00587 321 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 HAND1O96004 215 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 RFESDQ8TAC1 157 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ZPLD1Q8TCW7 415 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 PIK3IP1Q96FE7 263 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 PLPPR2Q96GM1 343 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 SGK494Q96LW2 274 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 PARD6AQ9NPB6 346 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM74BQ9NUR3 256 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF561Q8N587 486 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 P2RX4Q99571 388 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 NIT2Q9NQR4 276 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 MMP24Q9Y5R2 645 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF815PA8K554 130 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ARG1P05089 322 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ACAA2P42765 397 aaKnown RBP7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF343Q6P1L6 599 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 MIOXQ9UGB7 285 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 CLEC2DQ9UHP7 191 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM238LA0A1B0GVL6 79 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A1W2PR80 420 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 A6NJY4 79 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 CT62P0C5K7 136 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 COL8A1P27658 744 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 SLC6A1P30531 599 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 KISS1Q15726 138 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM241Q24JQ0 296 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 C12orf73Q69YU5 71 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ZDHHC22Q8N966 263 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 MRGPRDQ8TDS7 321 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 MAP6Q96JE9 813 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 GPR35Q9HC97 309 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 SLC52A3Q9NQ40 469 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 FCN1O00602 326 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 FGF9P31371 208 aaPredicted RBP7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ATG101Q9BSB4 218 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 NAV3Q8IVL0 2385 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 ZFYVE26Q68DK2 2539 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 SMPD2O60906 423 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 PDCD6O75340 191 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 CST7O76096 145 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 OR4P4Q8NGL7 312 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 GSX2Q9BZM3 304 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 CHODLQ9H9P2 273 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 NOTCH2Q04721 2471 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 CLDN18P56856 261 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 IGLV3-21P80748 117 aaPredicted RBP7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 KHDC3LQ587J8 217 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 LIAT1Q6ZQX7 453 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 MRGPRGQ86SM5 289 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 PI3P19957 117 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 TSPOP30536 169 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 TNFSF10P50591 281 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 FAM106AQ4KMX7 169 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 NEU4Q8WWR8 484 aaPredicted RBP7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 SPSB2Q99619 263 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 DCTN5Q9BTE1 182 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 CORTO00230 105 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 PTHLHP12272 177 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 ZFP36L1Q07352 338 aaKnown RBP7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 LRRC75BQ2VPJ9 315 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 RNFT1Q5M7Z0 435 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 DPH3P1Q9H4G8 78 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 FOXH1O75593 365 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 MMDQ15546 238 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 BCDIN3DQ7Z5W3 292 aaKnown RBP7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 OR1L8Q8NGR8 309 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 STARD4Q96DR4 205 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 EXOGQ9Y2C4 368 aaKnown RBP7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 NKX2-8O15522 239 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 PDLIM4P50479 330 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 ELOBQ15370 118 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF774Q6NX45 483 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 Q6ZT83 130 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 RPS4Y2Q8TD47 263 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 LINC00470Q9BZP3 86 aa7.28□□□□□ -1.24
PCDHB1-201ENST00000306549 J3KRW8 73 aa7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF324O75467 553 aaPredicted RBP7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 CD3DP04234 171 aa7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 G6PCP35575 357 aa7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 NUTF2P61970 127 aaKnown RBP7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 GUCA2AQ02747 115 aa7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 PCOLCEQ15113 449 aa7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 ELOVL1Q9BW60 279 aa7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 LPAR2Q9HBW0 351 aa7.27□□□□□ -1.24
PCDHB1-201ENST00000306549 C3orf85A0A1B0GTC6 90 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 FABP4P15090 132 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 ASAH1Q13510 395 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 TMEM78Q5T7P6 136 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 R3HDM4Q96D70 268 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 ALPK3Q96L96 1907 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 HARBI1Q96MB7 349 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 CACNG5Q9UF02 275 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 IL18BPO95998 194 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 MMP16P51512 607 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 C16orf92Q96LL3 132 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 C1QBP02746 253 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 C10orf113Q5VZT2 155 aa7.27□□□□□ -1.25
PCDHB1-201ENST00000306549 FAM53AQ6NSI3 398 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms